Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09130 and AZOBR_RS09135 overlap by 32 nucleotides AZOBR_RS09135 and AZOBR_RS09140 are separated by 260 nucleotides AZOBR_RS09140 and AZOBR_RS09145 are separated by 56 nucleotides AZOBR_RS09145 and AZOBR_RS09150 are separated by 13 nucleotides
AZOBR_RS09130: AZOBR_RS09130 - conserved membrane protein of unknown function, at 1,908,008 to 1,908,946
_RS09130
AZOBR_RS09135: AZOBR_RS09135 - GCN5 family acetyltransferase, at 1,908,915 to 1,909,355
_RS09135
AZOBR_RS09140: AZOBR_RS09140 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,909,616 to 1,910,920
_RS09140
AZOBR_RS09145: AZOBR_RS09145 - hypothetical protein, at 1,910,977 to 1,911,441
_RS09145
AZOBR_RS09150: AZOBR_RS09150 - peroxiredoxin, at 1,911,455 to 1,911,874
_RS09150
Position (kb)
1909
1910
1911 Strain fitness (log2 ratio)
-1
0
1 at 1908.645 kb on - strand, within AZOBR_RS09130 at 1908.720 kb on - strand at 1908.729 kb on - strand, within AZOBR_RS09130 at 1909.015 kb on + strand, within AZOBR_RS09135 at 1909.040 kb on - strand, within AZOBR_RS09135 at 1909.045 kb on + strand, within AZOBR_RS09135 at 1909.046 kb on - strand, within AZOBR_RS09135 at 1909.046 kb on - strand, within AZOBR_RS09135 at 1909.150 kb on + strand, within AZOBR_RS09135 at 1909.151 kb on - strand, within AZOBR_RS09135 at 1909.151 kb on - strand, within AZOBR_RS09135 at 1909.159 kb on + strand, within AZOBR_RS09135 at 1909.159 kb on + strand, within AZOBR_RS09135 at 1909.396 kb on - strand at 1909.472 kb on + strand at 1911.878 kb on + strand at 1911.878 kb on + strand at 1911.893 kb on + strand at 1911.894 kb on - strand at 1911.894 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,908,645 - AZOBR_RS09130 0.68 +0.2 1,908,720 - +0.8 1,908,729 - AZOBR_RS09130 0.77 -0.6 1,909,015 + AZOBR_RS09135 0.23 +1.2 1,909,040 - AZOBR_RS09135 0.28 +0.3 1,909,045 + AZOBR_RS09135 0.29 +0.5 1,909,046 - AZOBR_RS09135 0.30 +0.6 1,909,046 - AZOBR_RS09135 0.30 -0.0 1,909,150 + AZOBR_RS09135 0.53 +0.4 1,909,151 - AZOBR_RS09135 0.54 +0.3 1,909,151 - AZOBR_RS09135 0.54 +0.8 1,909,159 + AZOBR_RS09135 0.55 +0.0 1,909,159 + AZOBR_RS09135 0.55 +1.5 1,909,396 - -0.1 1,909,472 + -0.9 1,911,878 + +0.2 1,911,878 + +0.3 1,911,893 + -1.0 1,911,894 - +0.5 1,911,894 - -0.9
Or see this region's nucleotide sequence