Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06560 and AZOBR_RS06565 are separated by 50 nucleotides AZOBR_RS06565 and AZOBR_RS06570 are separated by 175 nucleotides AZOBR_RS06570 and AZOBR_RS06575 are separated by 176 nucleotides
AZOBR_RS06560: AZOBR_RS06560 - acetolactate synthase, at 1,389,133 to 1,390,896
_RS06560
AZOBR_RS06565: AZOBR_RS06565 - acetolactate synthase, at 1,390,947 to 1,391,453
_RS06565
AZOBR_RS06570: AZOBR_RS06570 - ketol-acid reductoisomerase, at 1,391,629 to 1,392,648
_RS06570
AZOBR_RS06575: AZOBR_RS06575 - PhoU family transcriptional regulator, at 1,392,825 to 1,393,529
_RS06575
Position (kb) 1391
1392
1393 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1390.939 kb on + strand at 1390.940 kb on - strand at 1390.940 kb on - strand at 1391.044 kb on - strand, within AZOBR_RS06565 at 1391.475 kb on + strand at 1393.033 kb on + strand, within AZOBR_RS06575 at 1393.033 kb on + strand, within AZOBR_RS06575 at 1393.033 kb on + strand, within AZOBR_RS06575 at 1393.099 kb on + strand, within AZOBR_RS06575 at 1393.099 kb on + strand, within AZOBR_RS06575 at 1393.099 kb on + strand, within AZOBR_RS06575 at 1393.099 kb on + strand, within AZOBR_RS06575 at 1393.100 kb on - strand, within AZOBR_RS06575 at 1393.100 kb on - strand, within AZOBR_RS06575 at 1393.100 kb on - strand, within AZOBR_RS06575 at 1393.345 kb on + strand, within AZOBR_RS06575 at 1393.345 kb on + strand, within AZOBR_RS06575 at 1393.345 kb on + strand, within AZOBR_RS06575 at 1393.345 kb on + strand, within AZOBR_RS06575 at 1393.345 kb on + strand, within AZOBR_RS06575 at 1393.346 kb on - strand, within AZOBR_RS06575 at 1393.346 kb on - strand, within AZOBR_RS06575 at 1393.346 kb on - strand, within AZOBR_RS06575
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,390,939 + -0.3 1,390,940 - +0.3 1,390,940 - -1.1 1,391,044 - AZOBR_RS06565 0.19 -1.0 1,391,475 + -0.2 1,393,033 + AZOBR_RS06575 0.30 +0.9 1,393,033 + AZOBR_RS06575 0.30 -0.0 1,393,033 + AZOBR_RS06575 0.30 +0.1 1,393,099 + AZOBR_RS06575 0.39 +0.7 1,393,099 + AZOBR_RS06575 0.39 +0.7 1,393,099 + AZOBR_RS06575 0.39 -0.3 1,393,099 + AZOBR_RS06575 0.39 +0.4 1,393,100 - AZOBR_RS06575 0.39 -0.9 1,393,100 - AZOBR_RS06575 0.39 -1.9 1,393,100 - AZOBR_RS06575 0.39 -0.1 1,393,345 + AZOBR_RS06575 0.74 -0.3 1,393,345 + AZOBR_RS06575 0.74 +2.3 1,393,345 + AZOBR_RS06575 0.74 +0.1 1,393,345 + AZOBR_RS06575 0.74 +0.2 1,393,345 + AZOBR_RS06575 0.74 -0.3 1,393,346 - AZOBR_RS06575 0.74 -0.2 1,393,346 - AZOBR_RS06575 0.74 +0.1 1,393,346 - AZOBR_RS06575 0.74 -2.4
Or see this region's nucleotide sequence