Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS03095

Experiment: 2-pentyl-furan 1.335528 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS03090 and AZOBR_RS03095 are separated by 5 nucleotidesAZOBR_RS03095 and AZOBR_RS03100 are separated by 155 nucleotides AZOBR_RS03090: AZOBR_RS03090 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 659,390 to 660,727 _RS03090 AZOBR_RS03095: AZOBR_RS03095 - cytidylate kinase, at 660,733 to 661,395 _RS03095 AZOBR_RS03100: AZOBR_RS03100 - 30S ribosomal protein S1, at 661,551 to 663,260 _RS03100 Position (kb) 660 661 662Strain fitness (log2 ratio) -1 0 1at 661.434 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM
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661,434 + +0.7

Or see this region's nucleotide sequence