Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03085 and AZOBR_RS03090 are separated by 87 nucleotides AZOBR_RS03090 and AZOBR_RS03095 are separated by 5 nucleotides AZOBR_RS03095 and AZOBR_RS03100 are separated by 155 nucleotides
AZOBR_RS03085: AZOBR_RS03085 - gamma-glutamyltransferase, at 657,578 to 659,302
_RS03085
AZOBR_RS03090: AZOBR_RS03090 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 659,390 to 660,727
_RS03090
AZOBR_RS03095: AZOBR_RS03095 - cytidylate kinase, at 660,733 to 661,395
_RS03095
AZOBR_RS03100: AZOBR_RS03100 - 30S ribosomal protein S1, at 661,551 to 663,260
_RS03100
Position (kb) 659
660
661 Strain fitness (log2 ratio) -2
-1
0
1
2 at 658.412 kb on + strand, within AZOBR_RS03085 at 658.413 kb on - strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.421 kb on + strand, within AZOBR_RS03085 at 658.422 kb on - strand, within AZOBR_RS03085 at 658.422 kb on - strand, within AZOBR_RS03085 at 658.422 kb on - strand, within AZOBR_RS03085 at 659.036 kb on + strand, within AZOBR_RS03085 at 659.037 kb on - strand, within AZOBR_RS03085 at 659.346 kb on + strand at 659.346 kb on + strand at 659.346 kb on + strand at 659.346 kb on + strand at 659.346 kb on + strand at 661.434 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 658,412 + AZOBR_RS03085 0.48 -0.8 658,413 - AZOBR_RS03085 0.48 -0.7 658,421 + AZOBR_RS03085 0.49 +0.5 658,421 + AZOBR_RS03085 0.49 +0.4 658,421 + AZOBR_RS03085 0.49 +0.2 658,421 + AZOBR_RS03085 0.49 -0.2 658,422 - AZOBR_RS03085 0.49 -0.3 658,422 - AZOBR_RS03085 0.49 -1.4 658,422 - AZOBR_RS03085 0.49 -0.2 659,036 + AZOBR_RS03085 0.85 -0.1 659,037 - AZOBR_RS03085 0.85 +2.3 659,346 + +2.3 659,346 + -0.3 659,346 + -2.3 659,346 + -2.7 659,346 + -0.1 661,434 + +0.7
Or see this region's nucleotide sequence