Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02355 and AZOBR_RS02360 are separated by 103 nucleotides AZOBR_RS02360 and AZOBR_RS02365 are separated by 191 nucleotides AZOBR_RS02365 and AZOBR_RS02370 are separated by 24 nucleotides AZOBR_RS02370 and AZOBR_RS02375 are separated by 99 nucleotides
AZOBR_RS02355: AZOBR_RS02355 - hypothetical protein, at 485,381 to 485,752
_RS02355
AZOBR_RS02360: AZOBR_RS02360 - hypothetical protein, at 485,856 to 486,371
_RS02360
AZOBR_RS02365: AZOBR_RS02365 - hypothetical protein, at 486,563 to 487,030
_RS02365
AZOBR_RS02370: AZOBR_RS02370 - hypothetical protein, at 487,055 to 487,252
_RS02370
AZOBR_RS02375: AZOBR_RS02375 - rubrerythrin, at 487,352 to 487,885
_RS02375
Position (kb) 485
486
487 Strain fitness (log2 ratio) -1
0
1 at 485.060 kb on - strand at 485.060 kb on - strand at 485.264 kb on + strand at 485.264 kb on + strand at 485.264 kb on + strand at 485.902 kb on + strand at 485.902 kb on + strand at 486.035 kb on - strand, within AZOBR_RS02360 at 486.064 kb on + strand, within AZOBR_RS02360 at 486.065 kb on - strand, within AZOBR_RS02360 at 486.692 kb on - strand, within AZOBR_RS02365 at 486.912 kb on - strand, within AZOBR_RS02365 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.174 kb on - strand, within AZOBR_RS02370 at 487.232 kb on - strand, within AZOBR_RS02370 at 487.232 kb on - strand, within AZOBR_RS02370
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 485,060 - -0.8 485,060 - -0.2 485,264 + -0.2 485,264 + -0.3 485,264 + -0.2 485,902 + -1.2 485,902 + -0.8 486,035 - AZOBR_RS02360 0.35 +0.3 486,064 + AZOBR_RS02360 0.40 +1.1 486,065 - AZOBR_RS02360 0.41 +1.0 486,692 - AZOBR_RS02365 0.28 -0.3 486,912 - AZOBR_RS02365 0.75 -0.0 487,174 - AZOBR_RS02370 0.60 +0.9 487,174 - AZOBR_RS02370 0.60 -0.4 487,174 - AZOBR_RS02370 0.60 +0.6 487,174 - AZOBR_RS02370 0.60 +0.3 487,232 - AZOBR_RS02370 0.89 -0.2 487,232 - AZOBR_RS02370 0.89 -0.9
Or see this region's nucleotide sequence