Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32090 and AZOBR_RS32095 overlap by 4 nucleotides AZOBR_RS32095 and AZOBR_RS32100 are separated by 506 nucleotides
AZOBR_RS32090: AZOBR_RS32090 - putative Poly(beta-D-mannuronate) C5 epimerase 3, at 566,616 to 571,850
_RS32090
AZOBR_RS32095: AZOBR_RS32095 - hypothetical protein, at 571,847 to 572,386
_RS32095
AZOBR_RS32100: AZOBR_RS32100 - cytochrome C, at 572,893 to 573,513
_RS32100
Position (kb) 571
572
573 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 571.069 kb on + strand, within AZOBR_RS32090 at 571.096 kb on - strand, within AZOBR_RS32090 at 571.243 kb on + strand, within AZOBR_RS32090 at 571.244 kb on - strand, within AZOBR_RS32090 at 571.244 kb on - strand, within AZOBR_RS32090 at 571.250 kb on - strand, within AZOBR_RS32090 at 571.250 kb on - strand, within AZOBR_RS32090 at 571.250 kb on - strand, within AZOBR_RS32090 at 571.314 kb on - strand, within AZOBR_RS32090 at 571.546 kb on + strand at 571.546 kb on + strand at 571.546 kb on + strand at 571.546 kb on + strand at 571.547 kb on - strand at 571.547 kb on - strand at 571.547 kb on - strand at 571.555 kb on + strand at 571.556 kb on - strand at 571.748 kb on - strand at 572.043 kb on + strand, within AZOBR_RS32095 at 572.043 kb on + strand, within AZOBR_RS32095 at 572.044 kb on - strand, within AZOBR_RS32095 at 572.044 kb on - strand, within AZOBR_RS32095 at 572.044 kb on - strand, within AZOBR_RS32095 at 572.272 kb on + strand, within AZOBR_RS32095 at 572.272 kb on + strand, within AZOBR_RS32095 at 572.272 kb on + strand, within AZOBR_RS32095 at 572.272 kb on + strand, within AZOBR_RS32095 at 572.273 kb on - strand, within AZOBR_RS32095 at 572.273 kb on - strand, within AZOBR_RS32095 at 572.530 kb on - strand at 572.586 kb on - strand at 572.656 kb on - strand at 572.661 kb on + strand at 572.662 kb on - strand at 572.820 kb on + strand at 572.820 kb on + strand at 572.820 kb on + strand at 573.005 kb on + strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.006 kb on - strand, within AZOBR_RS32100 at 573.317 kb on + strand, within AZOBR_RS32100
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 571,069 + AZOBR_RS32090 0.85 -3.6 571,096 - AZOBR_RS32090 0.86 -0.2 571,243 + AZOBR_RS32090 0.88 +0.0 571,244 - AZOBR_RS32090 0.88 -1.1 571,244 - AZOBR_RS32090 0.88 -1.3 571,250 - AZOBR_RS32090 0.89 +1.6 571,250 - AZOBR_RS32090 0.89 -0.0 571,250 - AZOBR_RS32090 0.89 +3.2 571,314 - AZOBR_RS32090 0.90 +0.4 571,546 + +0.5 571,546 + +1.3 571,546 + +2.4 571,546 + +0.7 571,547 - -0.2 571,547 - +1.7 571,547 - -1.0 571,555 + +0.0 571,556 - -1.4 571,748 - -0.9 572,043 + AZOBR_RS32095 0.36 +2.6 572,043 + AZOBR_RS32095 0.36 -0.4 572,044 - AZOBR_RS32095 0.36 +0.6 572,044 - AZOBR_RS32095 0.36 -1.1 572,044 - AZOBR_RS32095 0.36 -0.1 572,272 + AZOBR_RS32095 0.79 +0.9 572,272 + AZOBR_RS32095 0.79 +0.4 572,272 + AZOBR_RS32095 0.79 -0.8 572,272 + AZOBR_RS32095 0.79 -0.1 572,273 - AZOBR_RS32095 0.79 -0.6 572,273 - AZOBR_RS32095 0.79 +0.4 572,530 - +0.9 572,586 - -0.4 572,656 - -0.1 572,661 + -1.4 572,662 - +1.9 572,820 + +0.8 572,820 + -0.7 572,820 + +1.1 573,005 + AZOBR_RS32100 0.18 -2.1 573,006 - AZOBR_RS32100 0.18 +0.6 573,006 - AZOBR_RS32100 0.18 +0.6 573,006 - AZOBR_RS32100 0.18 +0.4 573,006 - AZOBR_RS32100 0.18 -0.6 573,317 + AZOBR_RS32100 0.68 +0.2
Or see this region's nucleotide sequence