Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31675 and AZOBR_RS31680 are separated by 267 nucleotides AZOBR_RS31680 and AZOBR_RS31685 are separated by 39 nucleotides
AZOBR_RS31675: AZOBR_RS31675 - uracil transporter, at 473,922 to 475,232
_RS31675
AZOBR_RS31680: AZOBR_RS31680 - diguanylate cyclase, at 475,500 to 476,516
_RS31680
AZOBR_RS31685: AZOBR_RS31685 - hypothetical protein, at 476,556 to 477,035
_RS31685
Position (kb) 475
476
477 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 474.710 kb on - strand, within AZOBR_RS31675 at 474.763 kb on + strand, within AZOBR_RS31675 at 474.764 kb on - strand, within AZOBR_RS31675 at 475.022 kb on - strand, within AZOBR_RS31675 at 475.055 kb on - strand, within AZOBR_RS31675 at 475.055 kb on - strand, within AZOBR_RS31675 at 475.055 kb on - strand, within AZOBR_RS31675 at 475.055 kb on - strand, within AZOBR_RS31675 at 475.272 kb on + strand at 475.357 kb on - strand at 475.403 kb on - strand at 475.485 kb on - strand at 475.526 kb on + strand at 475.526 kb on + strand at 475.617 kb on + strand, within AZOBR_RS31680 at 475.617 kb on + strand, within AZOBR_RS31680 at 475.617 kb on + strand, within AZOBR_RS31680 at 475.618 kb on - strand, within AZOBR_RS31680 at 475.618 kb on - strand, within AZOBR_RS31680 at 475.618 kb on - strand, within AZOBR_RS31680 at 475.618 kb on - strand, within AZOBR_RS31680 at 475.758 kb on + strand, within AZOBR_RS31680 at 475.758 kb on + strand, within AZOBR_RS31680 at 475.759 kb on - strand at 475.759 kb on - strand, within AZOBR_RS31680 at 475.824 kb on + strand, within AZOBR_RS31680 at 475.824 kb on + strand, within AZOBR_RS31680 at 475.824 kb on + strand, within AZOBR_RS31680 at 475.824 kb on + strand, within AZOBR_RS31680 at 475.825 kb on - strand, within AZOBR_RS31680 at 475.825 kb on - strand, within AZOBR_RS31680 at 475.825 kb on - strand, within AZOBR_RS31680 at 475.825 kb on - strand, within AZOBR_RS31680 at 476.016 kb on + strand, within AZOBR_RS31680 at 476.017 kb on - strand, within AZOBR_RS31680 at 476.017 kb on - strand, within AZOBR_RS31680 at 476.022 kb on + strand, within AZOBR_RS31680 at 476.023 kb on - strand, within AZOBR_RS31680 at 476.023 kb on - strand, within AZOBR_RS31680 at 476.023 kb on - strand, within AZOBR_RS31680 at 476.023 kb on - strand, within AZOBR_RS31680 at 476.478 kb on + strand at 476.478 kb on + strand at 476.478 kb on + strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.479 kb on - strand at 476.557 kb on + strand at 476.602 kb on + strand at 476.603 kb on - strand at 476.701 kb on + strand, within AZOBR_RS31685 at 477.164 kb on + strand at 477.508 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 474,710 - AZOBR_RS31675 0.60 -1.9 474,763 + AZOBR_RS31675 0.64 +2.1 474,764 - AZOBR_RS31675 0.64 +0.8 475,022 - AZOBR_RS31675 0.84 -0.3 475,055 - AZOBR_RS31675 0.86 +0.4 475,055 - AZOBR_RS31675 0.86 -0.6 475,055 - AZOBR_RS31675 0.86 -2.1 475,055 - AZOBR_RS31675 0.86 -0.8 475,272 + -2.7 475,357 - -1.2 475,403 - +0.5 475,485 - -0.4 475,526 + -2.6 475,526 + -1.7 475,617 + AZOBR_RS31680 0.12 -2.0 475,617 + AZOBR_RS31680 0.12 -2.4 475,617 + AZOBR_RS31680 0.12 +0.1 475,618 - AZOBR_RS31680 0.12 -1.6 475,618 - AZOBR_RS31680 0.12 +1.8 475,618 - AZOBR_RS31680 0.12 -1.6 475,618 - AZOBR_RS31680 0.12 -3.3 475,758 + AZOBR_RS31680 0.25 -2.5 475,758 + AZOBR_RS31680 0.25 -0.5 475,759 - +1.4 475,759 - AZOBR_RS31680 0.25 -1.5 475,824 + AZOBR_RS31680 0.32 -0.7 475,824 + AZOBR_RS31680 0.32 -4.6 475,824 + AZOBR_RS31680 0.32 -2.1 475,824 + AZOBR_RS31680 0.32 -0.4 475,825 - AZOBR_RS31680 0.32 -0.9 475,825 - AZOBR_RS31680 0.32 -0.5 475,825 - AZOBR_RS31680 0.32 -4.3 475,825 - AZOBR_RS31680 0.32 +0.8 476,016 + AZOBR_RS31680 0.51 -1.5 476,017 - AZOBR_RS31680 0.51 -1.0 476,017 - AZOBR_RS31680 0.51 -3.3 476,022 + AZOBR_RS31680 0.51 -0.2 476,023 - AZOBR_RS31680 0.51 +0.9 476,023 - AZOBR_RS31680 0.51 -0.7 476,023 - AZOBR_RS31680 0.51 -0.8 476,023 - AZOBR_RS31680 0.51 +0.7 476,478 + -2.0 476,478 + -2.1 476,478 + -1.9 476,479 - -0.4 476,479 - -0.8 476,479 - +0.4 476,479 - -0.4 476,479 - -3.8 476,479 - -3.8 476,479 - -0.7 476,479 - -0.7 476,479 - -2.2 476,479 - +0.7 476,479 - -1.3 476,479 - -4.5 476,479 - -3.2 476,479 - -0.6 476,557 + -0.1 476,602 + -0.1 476,603 - +1.1 476,701 + AZOBR_RS31685 0.30 +0.2 477,164 + -0.2 477,508 + -0.7
Or see this region's nucleotide sequence