Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29595 and AZOBR_RS29600 are separated by 520 nucleotides AZOBR_RS29600 and AZOBR_RS29605 are separated by 893 nucleotides
AZOBR_RS29595: AZOBR_RS29595 - hypothetical protein, at 769,610 to 770,242
_RS29595
AZOBR_RS29600: AZOBR_RS29600 - hypothetical protein, at 770,763 to 771,053
_RS29600
AZOBR_RS29605: AZOBR_RS29605 - transposase, at 771,947 to 772,924
_RS29605
Position (kb) 770
771
772 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.880 kb on - strand, within AZOBR_RS29595 at 769.891 kb on + strand, within AZOBR_RS29595 at 769.892 kb on - strand, within AZOBR_RS29595 at 770.225 kb on + strand at 770.285 kb on + strand at 770.379 kb on + strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.664 kb on + strand at 770.665 kb on - strand at 770.665 kb on - strand at 770.702 kb on + strand at 770.914 kb on + strand, within AZOBR_RS29600 at 770.915 kb on - strand, within AZOBR_RS29600 at 770.926 kb on + strand, within AZOBR_RS29600 at 770.926 kb on + strand, within AZOBR_RS29600 at 770.927 kb on - strand, within AZOBR_RS29600 at 771.051 kb on + strand at 771.051 kb on + strand at 771.052 kb on - strand at 771.052 kb on - strand at 771.060 kb on - strand at 771.248 kb on + strand at 771.248 kb on + strand at 771.300 kb on - strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.512 kb on + strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.513 kb on - strand at 771.515 kb on + strand at 771.515 kb on + strand at 771.516 kb on - strand at 771.516 kb on - strand at 771.578 kb on - strand at 771.578 kb on - strand at 771.578 kb on - strand at 771.587 kb on - strand at 771.921 kb on + strand at 772.032 kb on - strand at 772.032 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 769,879 + AZOBR_RS29595 0.42 -1.1 769,879 + AZOBR_RS29595 0.42 -0.7 769,880 - AZOBR_RS29595 0.43 -0.5 769,891 + AZOBR_RS29595 0.44 +2.5 769,892 - AZOBR_RS29595 0.45 +0.6 770,225 + -4.3 770,285 + -0.4 770,379 + -0.9 770,380 - -0.6 770,380 - +0.4 770,380 - -3.4 770,651 + -0.2 770,651 + +2.1 770,664 + -0.2 770,665 - +0.1 770,665 - +1.1 770,702 + -2.3 770,914 + AZOBR_RS29600 0.52 -2.2 770,915 - AZOBR_RS29600 0.52 -0.5 770,926 + AZOBR_RS29600 0.56 -2.1 770,926 + AZOBR_RS29600 0.56 -2.7 770,927 - AZOBR_RS29600 0.56 -0.9 771,051 + +0.2 771,051 + +2.1 771,052 - +1.1 771,052 - +1.0 771,060 - -3.0 771,248 + -2.0 771,248 + +2.1 771,300 - -2.7 771,512 + -0.7 771,512 + -0.6 771,512 + -0.2 771,512 + -2.2 771,512 + -0.9 771,512 + -2.3 771,513 - -0.7 771,513 - +0.5 771,513 - +1.2 771,513 - -0.8 771,513 - +0.4 771,513 - -0.2 771,513 - +0.2 771,513 - -0.0 771,515 + +1.2 771,515 + +0.2 771,516 - +2.0 771,516 - -0.1 771,578 - +0.9 771,578 - +0.7 771,578 - -0.3 771,587 - -1.0 771,921 + +0.5 772,032 - -1.1 772,032 - +0.5
Or see this region's nucleotide sequence