Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28010 and AZOBR_RS28015 are separated by 43 nucleotides AZOBR_RS28015 and AZOBR_RS28020 are separated by 10 nucleotides AZOBR_RS28020 and AZOBR_RS28025 are separated by 83 nucleotides
AZOBR_RS28010: AZOBR_RS28010 - hypothetical protein, at 454,869 to 455,702
_RS28010
AZOBR_RS28015: AZOBR_RS28015 - taurine catabolism dioxygenase TauD, at 455,746 to 456,597
_RS28015
AZOBR_RS28020: AZOBR_RS28020 - ABC transporter substrate-binding protein, at 456,608 to 457,609
_RS28020
AZOBR_RS28025: AZOBR_RS28025 - sulfurtransferase, at 457,693 to 459,312
_RS28025
Position (kb) 456
457
458 Strain fitness (log2 ratio) -2
-1
0
1
2 at 455.701 kb on - strand at 456.158 kb on + strand, within AZOBR_RS28015 at 456.159 kb on - strand, within AZOBR_RS28015 at 456.251 kb on + strand, within AZOBR_RS28015 at 456.251 kb on + strand, within AZOBR_RS28015 at 456.335 kb on + strand, within AZOBR_RS28015 at 456.335 kb on + strand, within AZOBR_RS28015 at 456.335 kb on + strand, within AZOBR_RS28015 at 456.336 kb on - strand, within AZOBR_RS28015 at 456.336 kb on - strand, within AZOBR_RS28015 at 456.336 kb on - strand, within AZOBR_RS28015 at 456.735 kb on + strand, within AZOBR_RS28020 at 456.736 kb on - strand, within AZOBR_RS28020 at 456.807 kb on + strand, within AZOBR_RS28020 at 456.807 kb on + strand, within AZOBR_RS28020 at 456.807 kb on + strand, within AZOBR_RS28020 at 456.807 kb on + strand, within AZOBR_RS28020 at 456.808 kb on - strand, within AZOBR_RS28020 at 456.961 kb on - strand, within AZOBR_RS28020 at 457.170 kb on + strand, within AZOBR_RS28020 at 457.171 kb on - strand, within AZOBR_RS28020 at 457.171 kb on - strand, within AZOBR_RS28020 at 457.257 kb on + strand, within AZOBR_RS28020 at 457.257 kb on + strand, within AZOBR_RS28020 at 457.416 kb on + strand, within AZOBR_RS28020 at 457.416 kb on + strand, within AZOBR_RS28020 at 457.417 kb on - strand, within AZOBR_RS28020 at 457.489 kb on - strand, within AZOBR_RS28020 at 457.729 kb on + strand at 457.730 kb on - strand at 457.803 kb on - strand at 457.803 kb on - strand at 457.815 kb on - strand at 457.815 kb on - strand at 457.971 kb on + strand, within AZOBR_RS28025 at 457.972 kb on - strand, within AZOBR_RS28025 at 457.972 kb on - strand, within AZOBR_RS28025 at 457.972 kb on - strand, within AZOBR_RS28025 at 457.972 kb on - strand, within AZOBR_RS28025 at 457.972 kb on - strand, within AZOBR_RS28025 at 458.039 kb on + strand, within AZOBR_RS28025 at 458.039 kb on + strand, within AZOBR_RS28025 at 458.040 kb on - strand, within AZOBR_RS28025 at 458.345 kb on + strand, within AZOBR_RS28025 at 458.415 kb on - strand, within AZOBR_RS28025
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 455,701 - -0.2 456,158 + AZOBR_RS28015 0.48 -0.5 456,159 - AZOBR_RS28015 0.48 +1.3 456,251 + AZOBR_RS28015 0.59 +1.7 456,251 + AZOBR_RS28015 0.59 -1.0 456,335 + AZOBR_RS28015 0.69 +0.7 456,335 + AZOBR_RS28015 0.69 -2.3 456,335 + AZOBR_RS28015 0.69 +1.1 456,336 - AZOBR_RS28015 0.69 -0.1 456,336 - AZOBR_RS28015 0.69 -0.7 456,336 - AZOBR_RS28015 0.69 +0.9 456,735 + AZOBR_RS28020 0.13 -1.6 456,736 - AZOBR_RS28020 0.13 -0.2 456,807 + AZOBR_RS28020 0.20 -2.3 456,807 + AZOBR_RS28020 0.20 +0.1 456,807 + AZOBR_RS28020 0.20 -2.4 456,807 + AZOBR_RS28020 0.20 -0.3 456,808 - AZOBR_RS28020 0.20 +0.3 456,961 - AZOBR_RS28020 0.35 +0.7 457,170 + AZOBR_RS28020 0.56 +1.4 457,171 - AZOBR_RS28020 0.56 +1.1 457,171 - AZOBR_RS28020 0.56 -0.6 457,257 + AZOBR_RS28020 0.65 -0.8 457,257 + AZOBR_RS28020 0.65 -2.6 457,416 + AZOBR_RS28020 0.81 +1.3 457,416 + AZOBR_RS28020 0.81 -0.2 457,417 - AZOBR_RS28020 0.81 +1.5 457,489 - AZOBR_RS28020 0.88 +1.9 457,729 + -1.4 457,730 - -0.8 457,803 - -0.8 457,803 - -0.2 457,815 - -2.3 457,815 - +0.1 457,971 + AZOBR_RS28025 0.17 +1.3 457,972 - AZOBR_RS28025 0.17 -0.3 457,972 - AZOBR_RS28025 0.17 +0.8 457,972 - AZOBR_RS28025 0.17 -0.7 457,972 - AZOBR_RS28025 0.17 -1.1 457,972 - AZOBR_RS28025 0.17 +0.6 458,039 + AZOBR_RS28025 0.21 +0.3 458,039 + AZOBR_RS28025 0.21 +0.0 458,040 - AZOBR_RS28025 0.21 -0.4 458,345 + AZOBR_RS28025 0.40 +0.2 458,415 - AZOBR_RS28025 0.45 -0.4
Or see this region's nucleotide sequence