Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27555 and AZOBR_RS27560 are separated by 482 nucleotides AZOBR_RS27560 and AZOBR_RS27565 are separated by 14 nucleotides
AZOBR_RS27555: AZOBR_RS27555 - hypothetical protein, at 344,289 to 344,822
_RS27555
AZOBR_RS27560: AZOBR_RS27560 - hypothetical protein, at 345,305 to 345,634
_RS27560
AZOBR_RS27565: AZOBR_RS27565 - GntR family transcriptional regulator, at 345,649 to 347,049
_RS27565
Position (kb) 345
346 Strain fitness (log2 ratio) -2
-1
0
1
2 at 344.392 kb on + strand, within AZOBR_RS27555 at 344.485 kb on + strand, within AZOBR_RS27555 at 344.485 kb on + strand, within AZOBR_RS27555 at 344.486 kb on - strand, within AZOBR_RS27555 at 344.533 kb on + strand, within AZOBR_RS27555 at 344.533 kb on + strand, within AZOBR_RS27555 at 344.533 kb on + strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.534 kb on - strand, within AZOBR_RS27555 at 344.542 kb on + strand, within AZOBR_RS27555 at 344.629 kb on + strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.630 kb on - strand, within AZOBR_RS27555 at 344.822 kb on + strand at 344.823 kb on - strand at 344.823 kb on - strand at 345.025 kb on + strand at 345.026 kb on + strand at 345.026 kb on - strand at 345.026 kb on - strand at 345.026 kb on - strand at 345.102 kb on + strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.103 kb on - strand at 345.805 kb on + strand, within AZOBR_RS27565 at 345.805 kb on + strand, within AZOBR_RS27565 at 345.806 kb on - strand, within AZOBR_RS27565 at 345.859 kb on + strand, within AZOBR_RS27565 at 345.860 kb on - strand, within AZOBR_RS27565 at 345.860 kb on - strand, within AZOBR_RS27565 at 346.078 kb on + strand, within AZOBR_RS27565 at 346.078 kb on + strand, within AZOBR_RS27565 at 346.259 kb on - strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.381 kb on + strand, within AZOBR_RS27565 at 346.382 kb on - strand, within AZOBR_RS27565 at 346.382 kb on - strand, within AZOBR_RS27565 at 346.470 kb on + strand, within AZOBR_RS27565 at 346.613 kb on - strand, within AZOBR_RS27565
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 344,392 + AZOBR_RS27555 0.19 -0.0 344,485 + AZOBR_RS27555 0.37 +0.0 344,485 + AZOBR_RS27555 0.37 -0.1 344,486 - AZOBR_RS27555 0.37 +0.1 344,533 + AZOBR_RS27555 0.46 -1.4 344,533 + AZOBR_RS27555 0.46 -1.0 344,533 + AZOBR_RS27555 0.46 +1.3 344,534 - AZOBR_RS27555 0.46 +0.8 344,534 - AZOBR_RS27555 0.46 -1.4 344,534 - AZOBR_RS27555 0.46 -2.3 344,534 - AZOBR_RS27555 0.46 +1.6 344,542 + AZOBR_RS27555 0.47 +0.8 344,629 + AZOBR_RS27555 0.64 +1.9 344,630 - AZOBR_RS27555 0.64 +0.5 344,630 - AZOBR_RS27555 0.64 +0.3 344,630 - AZOBR_RS27555 0.64 -0.1 344,630 - AZOBR_RS27555 0.64 -2.0 344,822 + -0.7 344,823 - +0.9 344,823 - +1.5 345,025 + +0.2 345,026 + +0.3 345,026 - -1.0 345,026 - +0.5 345,026 - -0.9 345,102 + -1.0 345,103 - +1.1 345,103 - -2.2 345,103 - +0.5 345,103 - +1.2 345,103 - -1.1 345,805 + AZOBR_RS27565 0.11 -1.2 345,805 + AZOBR_RS27565 0.11 +1.7 345,806 - AZOBR_RS27565 0.11 +1.0 345,859 + AZOBR_RS27565 0.15 -0.7 345,860 - AZOBR_RS27565 0.15 +0.4 345,860 - AZOBR_RS27565 0.15 -0.9 346,078 + AZOBR_RS27565 0.31 -0.2 346,078 + AZOBR_RS27565 0.31 +1.4 346,259 - AZOBR_RS27565 0.44 -0.7 346,381 + AZOBR_RS27565 0.52 -2.0 346,381 + AZOBR_RS27565 0.52 +1.1 346,381 + AZOBR_RS27565 0.52 -1.6 346,381 + AZOBR_RS27565 0.52 +0.4 346,382 - AZOBR_RS27565 0.52 +1.9 346,382 - AZOBR_RS27565 0.52 +0.5 346,470 + AZOBR_RS27565 0.59 +1.2 346,613 - AZOBR_RS27565 0.69 -0.3
Or see this region's nucleotide sequence