Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26450 and AZOBR_RS26455 are separated by 225 nucleotides AZOBR_RS26455 and AZOBR_RS26460 are separated by 34 nucleotides AZOBR_RS26460 and AZOBR_RS26465 are separated by 95 nucleotides
AZOBR_RS26450: AZOBR_RS26450 - short-chain dehydrogenase, at 79,549 to 80,298
_RS26450
AZOBR_RS26455: AZOBR_RS26455 - LysR family transcriptional regulator, at 80,524 to 81,462
_RS26455
AZOBR_RS26460: AZOBR_RS26460 - hypothetical protein, at 81,497 to 82,126
_RS26460
AZOBR_RS26465: AZOBR_RS26465 - MmgE/PrpD family protein 4, at 82,222 to 83,481
_RS26465
Position (kb) 80
81
82 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 79.598 kb on + strand at 79.598 kb on + strand at 79.599 kb on - strand at 79.599 kb on - strand at 79.946 kb on + strand, within AZOBR_RS26450 at 79.946 kb on + strand, within AZOBR_RS26450 at 79.946 kb on + strand, within AZOBR_RS26450 at 79.946 kb on + strand, within AZOBR_RS26450 at 79.946 kb on + strand, within AZOBR_RS26450 at 79.946 kb on + strand, within AZOBR_RS26450 at 79.947 kb on - strand, within AZOBR_RS26450 at 79.985 kb on + strand, within AZOBR_RS26450 at 79.985 kb on + strand, within AZOBR_RS26450 at 79.986 kb on - strand, within AZOBR_RS26450 at 79.986 kb on - strand, within AZOBR_RS26450 at 79.986 kb on - strand, within AZOBR_RS26450 at 80.482 kb on + strand at 80.963 kb on - strand, within AZOBR_RS26455 at 80.963 kb on - strand, within AZOBR_RS26455 at 80.963 kb on - strand, within AZOBR_RS26455 at 81.499 kb on - strand at 81.643 kb on - strand at 81.801 kb on + strand, within AZOBR_RS26460 at 81.802 kb on - strand, within AZOBR_RS26460 at 81.802 kb on - strand, within AZOBR_RS26460 at 81.960 kb on + strand, within AZOBR_RS26460 at 81.961 kb on - strand at 81.961 kb on - strand, within AZOBR_RS26460 at 81.967 kb on - strand, within AZOBR_RS26460 at 81.967 kb on - strand, within AZOBR_RS26460 at 82.024 kb on + strand, within AZOBR_RS26460 at 82.026 kb on + strand, within AZOBR_RS26460 at 82.298 kb on + strand at 82.299 kb on - strand at 82.389 kb on + strand, within AZOBR_RS26465 at 82.390 kb on - strand, within AZOBR_RS26465 at 82.390 kb on - strand, within AZOBR_RS26465
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 79,598 + -1.6 79,598 + -0.9 79,599 - +0.7 79,599 - +0.0 79,946 + AZOBR_RS26450 0.53 +1.2 79,946 + AZOBR_RS26450 0.53 +2.1 79,946 + AZOBR_RS26450 0.53 +0.7 79,946 + AZOBR_RS26450 0.53 -3.3 79,946 + AZOBR_RS26450 0.53 +1.1 79,946 + AZOBR_RS26450 0.53 -0.4 79,947 - AZOBR_RS26450 0.53 -0.9 79,985 + AZOBR_RS26450 0.58 -3.4 79,985 + AZOBR_RS26450 0.58 -1.5 79,986 - AZOBR_RS26450 0.58 -0.4 79,986 - AZOBR_RS26450 0.58 -0.5 79,986 - AZOBR_RS26450 0.58 -2.8 80,482 + -0.5 80,963 - AZOBR_RS26455 0.47 +2.1 80,963 - AZOBR_RS26455 0.47 +2.1 80,963 - AZOBR_RS26455 0.47 +1.1 81,499 - +0.4 81,643 - +1.5 81,801 + AZOBR_RS26460 0.48 -3.2 81,802 - AZOBR_RS26460 0.48 +0.3 81,802 - AZOBR_RS26460 0.48 +1.5 81,960 + AZOBR_RS26460 0.73 +0.9 81,961 - +1.1 81,961 - AZOBR_RS26460 0.74 +2.1 81,967 - AZOBR_RS26460 0.75 +1.1 81,967 - AZOBR_RS26460 0.75 -1.1 82,024 + AZOBR_RS26460 0.84 -1.1 82,026 + AZOBR_RS26460 0.84 -2.0 82,298 + +1.5 82,299 - +1.3 82,389 + AZOBR_RS26465 0.13 +1.6 82,390 - AZOBR_RS26465 0.13 -1.2 82,390 - AZOBR_RS26465 0.13 -0.4
Or see this region's nucleotide sequence