Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26405 and AZOBR_RS26410 overlap by 14 nucleotides AZOBR_RS26410 and AZOBR_RS26415 are separated by 14 nucleotides AZOBR_RS26415 and AZOBR_RS26420 are separated by 30 nucleotides
AZOBR_RS26405: AZOBR_RS26405 - amino acid ABC transporter ATP-binding protein, at 69,719 to 70,447
_RS26405
AZOBR_RS26410: AZOBR_RS26410 - amino acid ABC transporter permease, at 70,434 to 71,084
_RS26410
AZOBR_RS26415: AZOBR_RS26415 - ABC transporter permease, at 71,099 to 71,758
_RS26415
AZOBR_RS26420: AZOBR_RS26420 - amino acid deaminase, at 71,789 to 73,087
_RS26420
Position (kb) 71
72 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 70.410 kb on + strand at 70.410 kb on + strand at 70.411 kb on - strand at 70.504 kb on + strand, within AZOBR_RS26410 at 70.505 kb on - strand, within AZOBR_RS26410 at 70.505 kb on - strand, within AZOBR_RS26410 at 70.687 kb on + strand, within AZOBR_RS26410 at 70.799 kb on - strand, within AZOBR_RS26410 at 71.178 kb on + strand, within AZOBR_RS26415 at 71.178 kb on + strand, within AZOBR_RS26415 at 71.178 kb on + strand, within AZOBR_RS26415 at 71.200 kb on - strand, within AZOBR_RS26415 at 71.200 kb on - strand, within AZOBR_RS26415 at 71.217 kb on + strand, within AZOBR_RS26415 at 71.460 kb on + strand, within AZOBR_RS26415 at 71.461 kb on - strand, within AZOBR_RS26415 at 71.473 kb on - strand, within AZOBR_RS26415 at 71.592 kb on + strand, within AZOBR_RS26415 at 71.808 kb on + strand at 72.450 kb on + strand, within AZOBR_RS26420 at 72.451 kb on - strand, within AZOBR_RS26420 at 72.451 kb on - strand, within AZOBR_RS26420 at 72.451 kb on - strand, within AZOBR_RS26420
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 70,410 + -2.6 70,410 + +1.1 70,411 - -1.9 70,504 + AZOBR_RS26410 0.11 -0.6 70,505 - AZOBR_RS26410 0.11 -0.2 70,505 - AZOBR_RS26410 0.11 -0.7 70,687 + AZOBR_RS26410 0.39 -0.5 70,799 - AZOBR_RS26410 0.56 +0.2 71,178 + AZOBR_RS26415 0.12 -0.2 71,178 + AZOBR_RS26415 0.12 -1.1 71,178 + AZOBR_RS26415 0.12 -0.2 71,200 - AZOBR_RS26415 0.15 -1.8 71,200 - AZOBR_RS26415 0.15 -4.0 71,217 + AZOBR_RS26415 0.18 -3.8 71,460 + AZOBR_RS26415 0.55 -1.1 71,461 - AZOBR_RS26415 0.55 -3.5 71,473 - AZOBR_RS26415 0.57 +0.5 71,592 + AZOBR_RS26415 0.75 -2.4 71,808 + +0.2 72,450 + AZOBR_RS26420 0.51 -0.1 72,451 - AZOBR_RS26420 0.51 -1.0 72,451 - AZOBR_RS26420 0.51 +0.8 72,451 - AZOBR_RS26420 0.51 -0.3
Or see this region's nucleotide sequence