Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23695 and AZOBR_RS23700 are separated by 47 nucleotides AZOBR_RS23700 and AZOBR_RS23705 are separated by 203 nucleotides AZOBR_RS23705 and AZOBR_RS23710 are separated by 16 nucleotides AZOBR_RS23710 and AZOBR_RS23715 are separated by 218 nucleotides
AZOBR_RS23695: AZOBR_RS23695 - L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) <small>(from data)</small>, at 349,974 to 353,681
_RS23695
AZOBR_RS23700: AZOBR_RS23700 - hypothetical protein, at 353,729 to 353,917
_RS23700
AZOBR_RS23705: AZOBR_RS23705 - beta-lactamase, at 354,121 to 355,170
_RS23705
AZOBR_RS23710: AZOBR_RS23710 - extensin, at 355,187 to 355,894
_RS23710
AZOBR_RS23715: AZOBR_RS23715 - hypothetical protein, at 356,113 to 356,418
_RS23715
Position (kb) 354
355
356 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 353.134 kb on - strand, within AZOBR_RS23695 at 353.190 kb on + strand, within AZOBR_RS23695 at 353.256 kb on + strand, within AZOBR_RS23695 at 353.256 kb on + strand at 353.730 kb on + strand at 354.238 kb on + strand, within AZOBR_RS23705 at 354.262 kb on + strand, within AZOBR_RS23705 at 354.263 kb on - strand, within AZOBR_RS23705 at 354.263 kb on - strand, within AZOBR_RS23705 at 354.263 kb on - strand, within AZOBR_RS23705 at 354.263 kb on - strand, within AZOBR_RS23705 at 354.320 kb on + strand, within AZOBR_RS23705 at 354.320 kb on + strand, within AZOBR_RS23705 at 354.320 kb on + strand, within AZOBR_RS23705 at 354.320 kb on + strand, within AZOBR_RS23705 at 354.320 kb on + strand, within AZOBR_RS23705 at 354.320 kb on + strand, within AZOBR_RS23705 at 354.321 kb on - strand, within AZOBR_RS23705 at 354.321 kb on - strand, within AZOBR_RS23705 at 354.321 kb on - strand, within AZOBR_RS23705 at 354.475 kb on + strand, within AZOBR_RS23705 at 354.541 kb on + strand, within AZOBR_RS23705 at 354.541 kb on + strand, within AZOBR_RS23705 at 354.542 kb on - strand, within AZOBR_RS23705 at 354.542 kb on - strand, within AZOBR_RS23705 at 354.602 kb on - strand, within AZOBR_RS23705 at 354.730 kb on + strand, within AZOBR_RS23705 at 354.731 kb on - strand, within AZOBR_RS23705 at 354.731 kb on - strand, within AZOBR_RS23705 at 354.838 kb on + strand, within AZOBR_RS23705 at 354.838 kb on + strand, within AZOBR_RS23705 at 354.838 kb on + strand, within AZOBR_RS23705 at 354.838 kb on + strand, within AZOBR_RS23705 at 354.839 kb on - strand, within AZOBR_RS23705 at 354.839 kb on - strand, within AZOBR_RS23705 at 354.839 kb on - strand, within AZOBR_RS23705 at 354.916 kb on + strand, within AZOBR_RS23705 at 354.917 kb on - strand, within AZOBR_RS23705 at 355.156 kb on + strand at 355.156 kb on + strand at 355.248 kb on + strand at 355.462 kb on - strand, within AZOBR_RS23710 at 355.462 kb on - strand, within AZOBR_RS23710 at 355.895 kb on - strand at 355.895 kb on - strand at 355.986 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 353,134 - AZOBR_RS23695 0.85 -2.7 353,190 + AZOBR_RS23695 0.87 +0.7 353,256 + AZOBR_RS23695 0.89 +1.2 353,256 + -0.6 353,730 + -2.6 354,238 + AZOBR_RS23705 0.11 +0.4 354,262 + AZOBR_RS23705 0.13 -0.7 354,263 - AZOBR_RS23705 0.14 -0.1 354,263 - AZOBR_RS23705 0.14 +0.6 354,263 - AZOBR_RS23705 0.14 -1.0 354,263 - AZOBR_RS23705 0.14 +0.8 354,320 + AZOBR_RS23705 0.19 -2.1 354,320 + AZOBR_RS23705 0.19 -0.4 354,320 + AZOBR_RS23705 0.19 +0.9 354,320 + AZOBR_RS23705 0.19 -3.0 354,320 + AZOBR_RS23705 0.19 -0.5 354,320 + AZOBR_RS23705 0.19 -0.0 354,321 - AZOBR_RS23705 0.19 -0.7 354,321 - AZOBR_RS23705 0.19 -1.7 354,321 - AZOBR_RS23705 0.19 +0.4 354,475 + AZOBR_RS23705 0.34 +0.9 354,541 + AZOBR_RS23705 0.40 +0.8 354,541 + AZOBR_RS23705 0.40 +0.4 354,542 - AZOBR_RS23705 0.40 +1.0 354,542 - AZOBR_RS23705 0.40 +0.1 354,602 - AZOBR_RS23705 0.46 +1.8 354,730 + AZOBR_RS23705 0.58 -2.0 354,731 - AZOBR_RS23705 0.58 -2.0 354,731 - AZOBR_RS23705 0.58 -0.6 354,838 + AZOBR_RS23705 0.68 -0.3 354,838 + AZOBR_RS23705 0.68 +0.5 354,838 + AZOBR_RS23705 0.68 -1.3 354,838 + AZOBR_RS23705 0.68 +0.8 354,839 - AZOBR_RS23705 0.68 +3.3 354,839 - AZOBR_RS23705 0.68 +1.5 354,839 - AZOBR_RS23705 0.68 -0.3 354,916 + AZOBR_RS23705 0.76 -0.2 354,917 - AZOBR_RS23705 0.76 -0.8 355,156 + +0.0 355,156 + +0.2 355,248 + -0.4 355,462 - AZOBR_RS23710 0.39 -0.3 355,462 - AZOBR_RS23710 0.39 -2.4 355,895 - +0.4 355,895 - -0.4 355,986 + -0.7
Or see this region's nucleotide sequence