Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS21030 and AZOBR_RS21035 are separated by 103 nucleotides AZOBR_RS21035 and AZOBR_RS21040 are separated by 55 nucleotides
AZOBR_RS21030: AZOBR_RS21030 - MFS transporter, at 1,477,563 to 1,478,774
_RS21030
AZOBR_RS21035: AZOBR_RS21035 - gamma-glutamyltransferase, at 1,478,878 to 1,480,422
_RS21035
AZOBR_RS21040: AZOBR_RS21040 - hypothetical protein, at 1,480,478 to 1,481,515
_RS21040
Position (kb)
1478
1479
1480
1481 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1478.244 kb on + strand, within AZOBR_RS21030 at 1478.244 kb on + strand, within AZOBR_RS21030 at 1478.245 kb on - strand, within AZOBR_RS21030 at 1478.245 kb on - strand, within AZOBR_RS21030 at 1478.245 kb on - strand, within AZOBR_RS21030 at 1478.250 kb on + strand, within AZOBR_RS21030 at 1478.250 kb on + strand, within AZOBR_RS21030 at 1478.250 kb on + strand, within AZOBR_RS21030 at 1478.250 kb on + strand, within AZOBR_RS21030 at 1478.251 kb on - strand, within AZOBR_RS21030 at 1478.251 kb on - strand, within AZOBR_RS21030 at 1478.251 kb on - strand, within AZOBR_RS21030 at 1478.251 kb on - strand, within AZOBR_RS21030 at 1479.197 kb on + strand, within AZOBR_RS21035 at 1479.198 kb on - strand, within AZOBR_RS21035 at 1479.248 kb on + strand, within AZOBR_RS21035 at 1479.248 kb on + strand, within AZOBR_RS21035 at 1479.249 kb on - strand, within AZOBR_RS21035 at 1479.249 kb on - strand, within AZOBR_RS21035 at 1479.371 kb on + strand, within AZOBR_RS21035 at 1479.372 kb on - strand, within AZOBR_RS21035 at 1479.372 kb on - strand, within AZOBR_RS21035 at 1479.848 kb on + strand, within AZOBR_RS21035 at 1479.848 kb on + strand, within AZOBR_RS21035 at 1479.849 kb on - strand, within AZOBR_RS21035 at 1480.016 kb on + strand at 1480.017 kb on - strand, within AZOBR_RS21035 at 1480.095 kb on - strand, within AZOBR_RS21035 at 1480.491 kb on + strand at 1480.491 kb on + strand at 1480.672 kb on - strand, within AZOBR_RS21040 at 1480.899 kb on + strand, within AZOBR_RS21040 at 1480.899 kb on + strand, within AZOBR_RS21040 at 1480.900 kb on - strand, within AZOBR_RS21040 at 1481.196 kb on + strand, within AZOBR_RS21040 at 1481.358 kb on + strand, within AZOBR_RS21040
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,478,244 + AZOBR_RS21030 0.56 +0.9 1,478,244 + AZOBR_RS21030 0.56 -1.3 1,478,245 - AZOBR_RS21030 0.56 -2.0 1,478,245 - AZOBR_RS21030 0.56 -2.5 1,478,245 - AZOBR_RS21030 0.56 -1.2 1,478,250 + AZOBR_RS21030 0.57 -0.1 1,478,250 + AZOBR_RS21030 0.57 -0.2 1,478,250 + AZOBR_RS21030 0.57 -2.3 1,478,250 + AZOBR_RS21030 0.57 -2.2 1,478,251 - AZOBR_RS21030 0.57 +2.5 1,478,251 - AZOBR_RS21030 0.57 +0.1 1,478,251 - AZOBR_RS21030 0.57 -0.0 1,478,251 - AZOBR_RS21030 0.57 +0.7 1,479,197 + AZOBR_RS21035 0.21 -0.2 1,479,198 - AZOBR_RS21035 0.21 -0.8 1,479,248 + AZOBR_RS21035 0.24 -0.3 1,479,248 + AZOBR_RS21035 0.24 -0.5 1,479,249 - AZOBR_RS21035 0.24 +0.6 1,479,249 - AZOBR_RS21035 0.24 +2.0 1,479,371 + AZOBR_RS21035 0.32 +0.2 1,479,372 - AZOBR_RS21035 0.32 +0.4 1,479,372 - AZOBR_RS21035 0.32 -0.6 1,479,848 + AZOBR_RS21035 0.63 -0.3 1,479,848 + AZOBR_RS21035 0.63 +0.5 1,479,849 - AZOBR_RS21035 0.63 -1.4 1,480,016 + -0.3 1,480,017 - AZOBR_RS21035 0.74 -0.9 1,480,095 - AZOBR_RS21035 0.79 -0.7 1,480,491 + +1.3 1,480,491 + -1.5 1,480,672 - AZOBR_RS21040 0.19 -1.6 1,480,899 + AZOBR_RS21040 0.41 -0.7 1,480,899 + AZOBR_RS21040 0.41 -4.3 1,480,900 - AZOBR_RS21040 0.41 -2.3 1,481,196 + AZOBR_RS21040 0.69 -2.5 1,481,358 + AZOBR_RS21040 0.85 +0.0
Or see this region's nucleotide sequence