Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16880 and AZOBR_RS16885 are separated by 240 nucleotides AZOBR_RS16885 and AZOBR_RS16890 are separated by 7 nucleotides AZOBR_RS16890 and AZOBR_RS16895 are separated by 48 nucleotides AZOBR_RS16895 and AZOBR_RS16900 are separated by 143 nucleotides AZOBR_RS16900 and AZOBR_RS16905 are separated by 21 nucleotides
AZOBR_RS16880: AZOBR_RS16880 - conserved exported protein of unknown function, at 545,872 to 546,783
_RS16880
AZOBR_RS16885: AZOBR_RS16885 - hypothetical protein, at 547,024 to 547,284
_RS16885
AZOBR_RS16890: AZOBR_RS16890 - hypothetical protein, at 547,292 to 547,729
_RS16890
AZOBR_RS16895: AZOBR_RS16895 - beta-glucosidase, at 547,778 to 549,226
_RS16895
AZOBR_RS16900: AZOBR_RS16900 - hypothetical protein, at 549,370 to 549,564
_RS16900
AZOBR_RS16905: AZOBR_RS16905 - cob(I)yrinic acid a c-diamide adenosyltransferase, at 549,586 to 550,155
_RS16905
Position (kb) 547
548
549
550 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 546.987 kb on + strand at 546.990 kb on - strand at 547.006 kb on + strand at 547.006 kb on + strand at 547.006 kb on + strand at 547.007 kb on - strand at 547.139 kb on - strand, within AZOBR_RS16885 at 547.321 kb on - strand at 547.585 kb on - strand, within AZOBR_RS16890 at 547.743 kb on + strand at 547.744 kb on - strand at 547.821 kb on + strand at 547.821 kb on + strand at 547.821 kb on + strand at 547.822 kb on - strand at 547.830 kb on + strand at 547.830 kb on + strand at 547.830 kb on + strand at 547.830 kb on + strand at 547.831 kb on - strand at 548.004 kb on + strand, within AZOBR_RS16895 at 548.083 kb on - strand, within AZOBR_RS16895 at 548.101 kb on - strand, within AZOBR_RS16895 at 548.247 kb on + strand, within AZOBR_RS16895 at 548.247 kb on + strand, within AZOBR_RS16895 at 548.248 kb on - strand, within AZOBR_RS16895 at 548.250 kb on + strand, within AZOBR_RS16895 at 548.250 kb on + strand, within AZOBR_RS16895 at 548.250 kb on + strand, within AZOBR_RS16895 at 548.251 kb on - strand, within AZOBR_RS16895 at 548.251 kb on - strand, within AZOBR_RS16895 at 548.344 kb on - strand, within AZOBR_RS16895 at 548.412 kb on + strand, within AZOBR_RS16895 at 548.413 kb on - strand, within AZOBR_RS16895 at 548.556 kb on + strand, within AZOBR_RS16895 at 548.556 kb on + strand, within AZOBR_RS16895 at 548.688 kb on + strand, within AZOBR_RS16895 at 548.766 kb on + strand, within AZOBR_RS16895 at 548.823 kb on + strand, within AZOBR_RS16895 at 548.823 kb on + strand, within AZOBR_RS16895 at 548.823 kb on + strand, within AZOBR_RS16895 at 548.824 kb on - strand, within AZOBR_RS16895 at 548.898 kb on + strand, within AZOBR_RS16895 at 548.899 kb on - strand, within AZOBR_RS16895 at 548.952 kb on + strand, within AZOBR_RS16895 at 548.952 kb on + strand, within AZOBR_RS16895 at 548.952 kb on + strand, within AZOBR_RS16895 at 548.953 kb on - strand, within AZOBR_RS16895 at 548.953 kb on - strand, within AZOBR_RS16895 at 548.953 kb on - strand, within AZOBR_RS16895 at 549.266 kb on + strand at 549.266 kb on + strand at 549.266 kb on + strand at 549.266 kb on + strand at 549.266 kb on + strand at 549.266 kb on + strand at 549.266 kb on + strand at 549.267 kb on - strand at 549.267 kb on - strand at 549.267 kb on - strand at 549.335 kb on + strand at 549.335 kb on + strand at 549.362 kb on - strand at 549.607 kb on + strand at 549.607 kb on + strand at 549.608 kb on - strand at 549.688 kb on + strand, within AZOBR_RS16905 at 549.688 kb on + strand, within AZOBR_RS16905
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 546,987 + -0.4 546,990 - -2.0 547,006 + +0.7 547,006 + +1.3 547,006 + -0.7 547,007 - -1.8 547,139 - AZOBR_RS16885 0.44 +0.0 547,321 - -0.1 547,585 - AZOBR_RS16890 0.67 +1.5 547,743 + -0.5 547,744 - -1.1 547,821 + +0.9 547,821 + -2.3 547,821 + -0.1 547,822 - -0.4 547,830 + +0.3 547,830 + -1.3 547,830 + +1.1 547,830 + -1.9 547,831 - +0.8 548,004 + AZOBR_RS16895 0.16 -1.8 548,083 - AZOBR_RS16895 0.21 -0.3 548,101 - AZOBR_RS16895 0.22 +1.0 548,247 + AZOBR_RS16895 0.32 +1.0 548,247 + AZOBR_RS16895 0.32 -0.5 548,248 - AZOBR_RS16895 0.32 -1.7 548,250 + AZOBR_RS16895 0.33 +0.8 548,250 + AZOBR_RS16895 0.33 -3.6 548,250 + AZOBR_RS16895 0.33 -0.6 548,251 - AZOBR_RS16895 0.33 +0.1 548,251 - AZOBR_RS16895 0.33 -1.2 548,344 - AZOBR_RS16895 0.39 +1.3 548,412 + AZOBR_RS16895 0.44 +0.0 548,413 - AZOBR_RS16895 0.44 -0.8 548,556 + AZOBR_RS16895 0.54 -0.8 548,556 + AZOBR_RS16895 0.54 -0.8 548,688 + AZOBR_RS16895 0.63 -0.8 548,766 + AZOBR_RS16895 0.68 -0.9 548,823 + AZOBR_RS16895 0.72 -1.3 548,823 + AZOBR_RS16895 0.72 -2.8 548,823 + AZOBR_RS16895 0.72 -1.2 548,824 - AZOBR_RS16895 0.72 -0.5 548,898 + AZOBR_RS16895 0.77 +0.5 548,899 - AZOBR_RS16895 0.77 -1.1 548,952 + AZOBR_RS16895 0.81 -0.0 548,952 + AZOBR_RS16895 0.81 -1.1 548,952 + AZOBR_RS16895 0.81 -1.8 548,953 - AZOBR_RS16895 0.81 -2.3 548,953 - AZOBR_RS16895 0.81 +0.7 548,953 - AZOBR_RS16895 0.81 -0.8 549,266 + +0.0 549,266 + +0.2 549,266 + +0.4 549,266 + -1.5 549,266 + -0.3 549,266 + +0.9 549,266 + -1.5 549,267 - +0.6 549,267 - -2.5 549,267 - +0.0 549,335 + -2.3 549,335 + -0.6 549,362 - +3.0 549,607 + +0.1 549,607 + -1.3 549,608 - +0.4 549,688 + AZOBR_RS16905 0.18 -0.2 549,688 + AZOBR_RS16905 0.18 -0.1
Or see this region's nucleotide sequence