Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16550 and AZOBR_RS16555 are separated by 98 nucleotides AZOBR_RS16555 and AZOBR_RS16560 are separated by 192 nucleotides AZOBR_RS16560 and AZOBR_RS16565 are separated by 284 nucleotides
AZOBR_RS16550: AZOBR_RS16550 - ABC transporter permease, at 465,008 to 466,639
_RS16550
AZOBR_RS16555: AZOBR_RS16555 - ABC transporter substrate-binding protein, at 466,738 to 467,724
_RS16555
AZOBR_RS16560: AZOBR_RS16560 - hypothetical protein, at 467,917 to 468,306
_RS16560
AZOBR_RS16565: AZOBR_RS16565 - selenoprotein, at 468,591 to 468,872
_RS16565
Position (kb) 466
467
468 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 466.282 kb on - strand, within AZOBR_RS16550 at 466.282 kb on - strand, within AZOBR_RS16550 at 466.282 kb on - strand, within AZOBR_RS16550 at 466.808 kb on + strand at 466.809 kb on - strand at 466.858 kb on + strand, within AZOBR_RS16555 at 467.063 kb on + strand, within AZOBR_RS16555 at 467.063 kb on + strand, within AZOBR_RS16555 at 467.081 kb on + strand, within AZOBR_RS16555 at 467.165 kb on + strand, within AZOBR_RS16555 at 467.165 kb on + strand, within AZOBR_RS16555 at 467.166 kb on - strand, within AZOBR_RS16555 at 467.166 kb on - strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.168 kb on + strand, within AZOBR_RS16555 at 467.169 kb on - strand, within AZOBR_RS16555 at 467.231 kb on + strand, within AZOBR_RS16555 at 467.232 kb on - strand, within AZOBR_RS16555 at 467.415 kb on - strand, within AZOBR_RS16555 at 467.631 kb on - strand at 467.631 kb on - strand at 467.631 kb on - strand at 468.256 kb on + strand, within AZOBR_RS16560 at 468.256 kb on + strand, within AZOBR_RS16560 at 468.257 kb on - strand, within AZOBR_RS16560 at 468.356 kb on - strand at 468.432 kb on + strand at 468.433 kb on - strand at 468.433 kb on - strand at 468.517 kb on + strand at 468.518 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 466,282 - AZOBR_RS16550 0.78 -0.8 466,282 - AZOBR_RS16550 0.78 +0.7 466,282 - AZOBR_RS16550 0.78 +0.3 466,808 + +1.2 466,809 - +0.0 466,858 + AZOBR_RS16555 0.12 +1.6 467,063 + AZOBR_RS16555 0.33 +0.0 467,063 + AZOBR_RS16555 0.33 -0.3 467,081 + AZOBR_RS16555 0.35 -3.4 467,165 + AZOBR_RS16555 0.43 -0.6 467,165 + AZOBR_RS16555 0.43 +0.5 467,166 - AZOBR_RS16555 0.43 -0.5 467,166 - AZOBR_RS16555 0.43 -2.7 467,168 + AZOBR_RS16555 0.44 -3.2 467,168 + AZOBR_RS16555 0.44 -0.1 467,168 + AZOBR_RS16555 0.44 -1.1 467,168 + AZOBR_RS16555 0.44 -1.1 467,169 - AZOBR_RS16555 0.44 +0.1 467,231 + AZOBR_RS16555 0.50 -1.9 467,232 - AZOBR_RS16555 0.50 -3.1 467,415 - AZOBR_RS16555 0.69 +0.5 467,631 - +1.0 467,631 - +1.2 467,631 - -1.3 468,256 + AZOBR_RS16560 0.87 -1.9 468,256 + AZOBR_RS16560 0.87 +2.3 468,257 - AZOBR_RS16560 0.87 +0.0 468,356 - -2.1 468,432 + +1.6 468,433 - +0.5 468,433 - +0.0 468,517 + +0.5 468,518 - +0.1
Or see this region's nucleotide sequence