Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14500 and AZOBR_RS14505 are separated by 7 nucleotides AZOBR_RS14505 and AZOBR_RS14510 are separated by 11 nucleotides AZOBR_RS14510 and AZOBR_RS14515 are separated by 10 nucleotides
AZOBR_RS14500: AZOBR_RS14500 - nucleoside triphosphate pyrophosphohydrolase, at 22,783 to 23,592
_RS14500
AZOBR_RS14505: AZOBR_RS14505 - hydrogenase, at 23,600 to 24,121
_RS14505
AZOBR_RS14510: AZOBR_RS14510 - hydrogenase expression protein HypE, at 24,133 to 25,674
_RS14510
AZOBR_RS14515: AZOBR_RS14515 - oxidoreductase, at 25,685 to 27,142
_RS14515
Position (kb) 24
25
26 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 23.725 kb on - strand, within AZOBR_RS14505 at 23.913 kb on + strand, within AZOBR_RS14505 at 24.134 kb on + strand at 24.134 kb on + strand at 24.134 kb on + strand at 24.134 kb on + strand at 24.135 kb on - strand at 24.153 kb on - strand at 24.524 kb on + strand, within AZOBR_RS14510 at 24.671 kb on + strand, within AZOBR_RS14510 at 24.671 kb on + strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 24.672 kb on - strand, within AZOBR_RS14510 at 25.250 kb on + strand, within AZOBR_RS14510 at 25.251 kb on - strand, within AZOBR_RS14510 at 25.367 kb on + strand, within AZOBR_RS14510 at 25.368 kb on - strand, within AZOBR_RS14510 at 25.671 kb on - strand at 25.671 kb on - strand at 25.776 kb on + strand at 26.119 kb on - strand, within AZOBR_RS14515 at 26.222 kb on - strand, within AZOBR_RS14515 at 26.238 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.625 kb on + strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515 at 26.626 kb on - strand, within AZOBR_RS14515
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 23,725 - AZOBR_RS14505 0.24 +0.9 23,913 + AZOBR_RS14505 0.60 +0.2 24,134 + -0.1 24,134 + +1.0 24,134 + +0.4 24,134 + -1.4 24,135 - +1.0 24,153 - +0.3 24,524 + AZOBR_RS14510 0.25 -0.6 24,671 + AZOBR_RS14510 0.35 -0.4 24,671 + AZOBR_RS14510 0.35 -0.0 24,672 - AZOBR_RS14510 0.35 -0.6 24,672 - AZOBR_RS14510 0.35 -0.3 24,672 - AZOBR_RS14510 0.35 -0.2 24,672 - AZOBR_RS14510 0.35 -1.0 25,250 + AZOBR_RS14510 0.72 -1.5 25,251 - AZOBR_RS14510 0.73 -0.3 25,367 + AZOBR_RS14510 0.80 +0.7 25,368 - AZOBR_RS14510 0.80 -0.8 25,671 - -0.3 25,671 - +1.5 25,776 + -1.5 26,119 - AZOBR_RS14515 0.30 -0.6 26,222 - AZOBR_RS14515 0.37 +0.1 26,238 + AZOBR_RS14515 0.38 -0.5 26,625 + AZOBR_RS14515 0.64 +0.2 26,625 + AZOBR_RS14515 0.64 -0.4 26,625 + AZOBR_RS14515 0.64 -0.7 26,625 + AZOBR_RS14515 0.64 +0.8 26,626 - AZOBR_RS14515 0.65 -0.5 26,626 - AZOBR_RS14515 0.65 -1.0 26,626 - AZOBR_RS14515 0.65 -3.2 26,626 - AZOBR_RS14515 0.65 -1.0
Or see this region's nucleotide sequence