Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14110 and AZOBR_RS14115 are separated by 165 nucleotides AZOBR_RS14115 and AZOBR_RS14120 are separated by 903 nucleotides
AZOBR_RS14110: AZOBR_RS14110 - pyridoxamine kinase, at 2,968,455 to 2,969,315
_RS14110
AZOBR_RS14115: AZOBR_RS14115 - (3S)-malyl-CoA thiolesterase, at 2,969,481 to 2,970,356
_RS14115
AZOBR_RS14120: AZOBR_RS14120 - hypothetical protein, at 2,971,260 to 2,971,778
_RS14120
Position (kb)
2969
2970
2971 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2968.567 kb on + strand, within AZOBR_RS14110 at 2968.567 kb on + strand, within AZOBR_RS14110 at 2968.567 kb on + strand, within AZOBR_RS14110 at 2968.567 kb on + strand, within AZOBR_RS14110 at 2968.568 kb on - strand, within AZOBR_RS14110 at 2968.568 kb on - strand, within AZOBR_RS14110 at 2968.568 kb on - strand, within AZOBR_RS14110 at 2968.568 kb on - strand, within AZOBR_RS14110 at 2968.568 kb on - strand, within AZOBR_RS14110 at 2968.621 kb on + strand, within AZOBR_RS14110 at 2968.622 kb on - strand, within AZOBR_RS14110 at 2968.864 kb on + strand, within AZOBR_RS14110 at 2968.865 kb on - strand, within AZOBR_RS14110 at 2968.993 kb on + strand, within AZOBR_RS14110 at 2968.994 kb on - strand, within AZOBR_RS14110 at 2969.071 kb on + strand, within AZOBR_RS14110 at 2969.071 kb on + strand, within AZOBR_RS14110 at 2969.072 kb on - strand, within AZOBR_RS14110 at 2969.072 kb on - strand, within AZOBR_RS14110 at 2969.406 kb on + strand at 2969.407 kb on - strand at 2969.517 kb on + strand at 2969.517 kb on + strand at 2969.517 kb on + strand at 2969.517 kb on + strand at 2969.518 kb on - strand at 2969.518 kb on - strand at 2969.518 kb on - strand at 2969.664 kb on + strand, within AZOBR_RS14115 at 2969.719 kb on - strand, within AZOBR_RS14115 at 2970.395 kb on - strand at 2970.686 kb on + strand at 2971.118 kb on + strand at 2971.153 kb on + strand at 2971.171 kb on - strand at 2971.197 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,968,567 + AZOBR_RS14110 0.13 +0.3 2,968,567 + AZOBR_RS14110 0.13 -0.1 2,968,567 + AZOBR_RS14110 0.13 +0.1 2,968,567 + AZOBR_RS14110 0.13 -0.2 2,968,568 - AZOBR_RS14110 0.13 +1.7 2,968,568 - AZOBR_RS14110 0.13 +0.4 2,968,568 - AZOBR_RS14110 0.13 -2.7 2,968,568 - AZOBR_RS14110 0.13 +0.1 2,968,568 - AZOBR_RS14110 0.13 -0.1 2,968,621 + AZOBR_RS14110 0.19 -1.1 2,968,622 - AZOBR_RS14110 0.19 +0.2 2,968,864 + AZOBR_RS14110 0.48 -1.7 2,968,865 - AZOBR_RS14110 0.48 +0.4 2,968,993 + AZOBR_RS14110 0.62 -1.1 2,968,994 - AZOBR_RS14110 0.63 +0.4 2,969,071 + AZOBR_RS14110 0.72 -0.2 2,969,071 + AZOBR_RS14110 0.72 +0.6 2,969,072 - AZOBR_RS14110 0.72 +0.7 2,969,072 - AZOBR_RS14110 0.72 -0.3 2,969,406 + -0.2 2,969,407 - +0.3 2,969,517 + -2.6 2,969,517 + -3.1 2,969,517 + -1.7 2,969,517 + +0.3 2,969,518 - +1.3 2,969,518 - +0.5 2,969,518 - -0.8 2,969,664 + AZOBR_RS14115 0.21 -0.9 2,969,719 - AZOBR_RS14115 0.27 -0.7 2,970,395 - -1.0 2,970,686 + -0.9 2,971,118 + -0.9 2,971,153 + -0.2 2,971,171 - +1.9 2,971,197 + -0.8
Or see this region's nucleotide sequence