Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13520 and AZOBR_RS13525 overlap by 4 nucleotides AZOBR_RS13525 and AZOBR_RS13530 are separated by 305 nucleotides AZOBR_RS13530 and AZOBR_RS13535 are separated by 97 nucleotides
AZOBR_RS13520: AZOBR_RS13520 - dihydroorotate dehydrogenase, at 2,870,145 to 2,871,218
_RS13520
AZOBR_RS13525: AZOBR_RS13525 - glutathione S-transferase, at 2,871,215 to 2,871,577
_RS13525
AZOBR_RS13530: AZOBR_RS13530 - hypothetical protein, at 2,871,883 to 2,872,131
_RS13530
AZOBR_RS13535: AZOBR_RS13535 - hydrolase, at 2,872,229 to 2,872,630
_RS13535
Position (kb)
2871
2872
2873 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2871.318 kb on + strand, within AZOBR_RS13525 at 2871.508 kb on - strand, within AZOBR_RS13525 at 2871.508 kb on - strand, within AZOBR_RS13525 at 2871.553 kb on + strand at 2871.553 kb on + strand at 2871.553 kb on + strand at 2871.553 kb on + strand at 2871.553 kb on + strand at 2871.553 kb on + strand at 2871.554 kb on - strand at 2871.554 kb on - strand at 2871.653 kb on + strand at 2871.653 kb on + strand at 2871.653 kb on + strand at 2871.654 kb on - strand at 2871.654 kb on - strand at 2871.830 kb on + strand at 2871.831 kb on - strand at 2872.102 kb on + strand, within AZOBR_RS13530 at 2872.102 kb on + strand, within AZOBR_RS13530 at 2872.102 kb on + strand, within AZOBR_RS13530 at 2872.102 kb on + strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.103 kb on - strand, within AZOBR_RS13530 at 2872.245 kb on + strand at 2872.245 kb on + strand at 2872.246 kb on - strand at 2872.742 kb on + strand at 2872.847 kb on + strand at 2872.847 kb on + strand at 2872.847 kb on + strand at 2872.847 kb on + strand at 2872.848 kb on - strand at 2872.848 kb on - strand at 2872.871 kb on + strand at 2872.871 kb on + strand at 2872.872 kb on - strand at 2872.872 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,871,318 + AZOBR_RS13525 0.28 -1.6 2,871,508 - AZOBR_RS13525 0.81 -2.9 2,871,508 - AZOBR_RS13525 0.81 -1.9 2,871,553 + -0.4 2,871,553 + -0.1 2,871,553 + -0.4 2,871,553 + -2.1 2,871,553 + +0.9 2,871,553 + +0.9 2,871,554 - -1.0 2,871,554 - -2.6 2,871,653 + -1.8 2,871,653 + +1.2 2,871,653 + +2.5 2,871,654 - +0.5 2,871,654 - -0.5 2,871,830 + -1.1 2,871,831 - +1.0 2,872,102 + AZOBR_RS13530 0.88 +0.2 2,872,102 + AZOBR_RS13530 0.88 -1.3 2,872,102 + AZOBR_RS13530 0.88 +0.7 2,872,102 + AZOBR_RS13530 0.88 -0.6 2,872,103 - AZOBR_RS13530 0.88 +0.0 2,872,103 - AZOBR_RS13530 0.88 -1.3 2,872,103 - AZOBR_RS13530 0.88 +0.9 2,872,103 - AZOBR_RS13530 0.88 +0.1 2,872,103 - AZOBR_RS13530 0.88 +0.7 2,872,103 - AZOBR_RS13530 0.88 +0.0 2,872,103 - AZOBR_RS13530 0.88 -0.2 2,872,245 + -2.0 2,872,245 + -1.7 2,872,246 - -0.5 2,872,742 + -0.1 2,872,847 + -0.3 2,872,847 + -0.4 2,872,847 + -0.5 2,872,847 + -0.4 2,872,848 - -0.5 2,872,848 - +0.7 2,872,871 + -0.7 2,872,871 + -0.4 2,872,872 - -1.0 2,872,872 - -0.7
Or see this region's nucleotide sequence