Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13140 and AZOBR_RS13145 are separated by 28 nucleotides AZOBR_RS13145 and AZOBR_RS13150 are separated by 39 nucleotides AZOBR_RS13150 and AZOBR_RS13155 are separated by 46 nucleotides
AZOBR_RS13140: AZOBR_RS13140 - glyoxylate reductase (NADP+), at 2,772,513 to 2,773,172
_RS13140
AZOBR_RS13145: AZOBR_RS13145 - hypothetical protein, at 2,773,201 to 2,773,986
_RS13145
AZOBR_RS13150: AZOBR_RS13150 - ABC transporter substrate-binding protein, at 2,774,026 to 2,775,030
_RS13150
AZOBR_RS13155: AZOBR_RS13155 - acyl-CoA dehydrogenase, at 2,775,077 to 2,776,303
_RS13155
Position (kb)
2774
2775
2776 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2773.119 kb on + strand at 2773.119 kb on + strand at 2773.119 kb on + strand at 2773.167 kb on + strand at 2773.331 kb on - strand, within AZOBR_RS13145 at 2773.336 kb on + strand, within AZOBR_RS13145 at 2773.337 kb on - strand, within AZOBR_RS13145 at 2773.577 kb on - strand, within AZOBR_RS13145 at 2773.642 kb on + strand, within AZOBR_RS13145 at 2773.643 kb on - strand, within AZOBR_RS13145 at 2773.643 kb on - strand, within AZOBR_RS13145 at 2773.669 kb on + strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.690 kb on - strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.830 kb on + strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.831 kb on - strand, within AZOBR_RS13150 at 2774.941 kb on + strand at 2774.941 kb on + strand at 2774.942 kb on - strand at 2775.123 kb on + strand at 2775.389 kb on + strand, within AZOBR_RS13155 at 2775.389 kb on + strand, within AZOBR_RS13155 at 2775.593 kb on + strand, within AZOBR_RS13155 at 2775.593 kb on + strand, within AZOBR_RS13155 at 2775.887 kb on + strand, within AZOBR_RS13155
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,773,119 + -0.3 2,773,119 + -0.8 2,773,119 + -0.3 2,773,167 + -0.1 2,773,331 - AZOBR_RS13145 0.17 +0.6 2,773,336 + AZOBR_RS13145 0.17 -2.0 2,773,337 - AZOBR_RS13145 0.17 -1.6 2,773,577 - AZOBR_RS13145 0.48 -1.3 2,773,642 + AZOBR_RS13145 0.56 -0.1 2,773,643 - AZOBR_RS13145 0.56 +0.8 2,773,643 - AZOBR_RS13145 0.56 -1.4 2,773,669 + AZOBR_RS13145 0.60 +1.4 2,773,670 - AZOBR_RS13145 0.60 -1.8 2,773,670 - AZOBR_RS13145 0.60 +1.1 2,773,670 - AZOBR_RS13145 0.60 +0.3 2,774,690 - AZOBR_RS13150 0.66 -4.0 2,774,690 - AZOBR_RS13150 0.66 +1.1 2,774,830 + AZOBR_RS13150 0.80 -0.2 2,774,830 + AZOBR_RS13150 0.80 +0.8 2,774,831 - AZOBR_RS13150 0.80 -0.8 2,774,831 - AZOBR_RS13150 0.80 -0.3 2,774,831 - AZOBR_RS13150 0.80 +0.7 2,774,831 - AZOBR_RS13150 0.80 -0.3 2,774,831 - AZOBR_RS13150 0.80 -0.1 2,774,831 - AZOBR_RS13150 0.80 +0.7 2,774,941 + +0.9 2,774,941 + -1.8 2,774,942 - -0.0 2,775,123 + -0.5 2,775,389 + AZOBR_RS13155 0.25 -0.3 2,775,389 + AZOBR_RS13155 0.25 -0.6 2,775,593 + AZOBR_RS13155 0.42 +0.5 2,775,593 + AZOBR_RS13155 0.42 -0.8 2,775,887 + AZOBR_RS13155 0.66 -0.2
Or see this region's nucleotide sequence