Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13135 and AZOBR_RS13140 are separated by 72 nucleotides AZOBR_RS13140 and AZOBR_RS13145 are separated by 28 nucleotides AZOBR_RS13145 and AZOBR_RS13150 are separated by 39 nucleotides
AZOBR_RS13135: AZOBR_RS13135 - hypothetical protein, at 2,772,228 to 2,772,440
_RS13135
AZOBR_RS13140: AZOBR_RS13140 - glyoxylate reductase (NADP+), at 2,772,513 to 2,773,172
_RS13140
AZOBR_RS13145: AZOBR_RS13145 - hypothetical protein, at 2,773,201 to 2,773,986
_RS13145
AZOBR_RS13150: AZOBR_RS13150 - ABC transporter substrate-binding protein, at 2,774,026 to 2,775,030
_RS13150
Position (kb)
2772
2773
2774 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2771.540 kb on + strand at 2771.540 kb on + strand at 2771.540 kb on + strand at 2771.540 kb on + strand at 2771.541 kb on - strand at 2771.579 kb on + strand at 2772.048 kb on + strand at 2772.049 kb on - strand at 2772.049 kb on - strand at 2772.051 kb on + strand at 2772.052 kb on - strand at 2772.052 kb on - strand at 2772.052 kb on - strand at 2772.114 kb on + strand at 2772.114 kb on + strand at 2772.114 kb on + strand at 2772.115 kb on - strand at 2772.115 kb on - strand at 2772.115 kb on - strand at 2772.419 kb on + strand at 2772.448 kb on + strand at 2772.448 kb on + strand at 2772.525 kb on + strand at 2772.526 kb on - strand at 2772.526 kb on - strand at 2772.529 kb on + strand at 2772.529 kb on + strand at 2772.529 kb on + strand at 2772.529 kb on + strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2772.530 kb on - strand at 2773.021 kb on - strand, within AZOBR_RS13140 at 2773.119 kb on + strand at 2773.119 kb on + strand at 2773.119 kb on + strand at 2773.167 kb on + strand at 2773.331 kb on - strand, within AZOBR_RS13145 at 2773.336 kb on + strand, within AZOBR_RS13145 at 2773.337 kb on - strand, within AZOBR_RS13145 at 2773.577 kb on - strand, within AZOBR_RS13145 at 2773.642 kb on + strand, within AZOBR_RS13145 at 2773.643 kb on - strand, within AZOBR_RS13145 at 2773.643 kb on - strand, within AZOBR_RS13145 at 2773.669 kb on + strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145 at 2773.670 kb on - strand, within AZOBR_RS13145
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,771,540 + -1.8 2,771,540 + -2.6 2,771,540 + -0.2 2,771,540 + -0.1 2,771,541 - -1.1 2,771,579 + -0.1 2,772,048 + +0.0 2,772,049 - -2.8 2,772,049 - +0.2 2,772,051 + -0.3 2,772,052 - +1.3 2,772,052 - -0.5 2,772,052 - -0.1 2,772,114 + +0.1 2,772,114 + -0.6 2,772,114 + -0.6 2,772,115 - -1.4 2,772,115 - +0.1 2,772,115 - -0.9 2,772,419 + +0.0 2,772,448 + -0.3 2,772,448 + -0.2 2,772,525 + -1.0 2,772,526 - -0.5 2,772,526 - +0.0 2,772,529 + +0.4 2,772,529 + +0.4 2,772,529 + +1.6 2,772,529 + +0.4 2,772,530 - -0.2 2,772,530 - +0.7 2,772,530 - +3.5 2,772,530 - +0.4 2,772,530 - +0.4 2,773,021 - AZOBR_RS13140 0.77 -1.0 2,773,119 + -0.3 2,773,119 + -0.8 2,773,119 + -0.3 2,773,167 + -0.1 2,773,331 - AZOBR_RS13145 0.17 +0.6 2,773,336 + AZOBR_RS13145 0.17 -2.0 2,773,337 - AZOBR_RS13145 0.17 -1.6 2,773,577 - AZOBR_RS13145 0.48 -1.3 2,773,642 + AZOBR_RS13145 0.56 -0.1 2,773,643 - AZOBR_RS13145 0.56 +0.8 2,773,643 - AZOBR_RS13145 0.56 -1.4 2,773,669 + AZOBR_RS13145 0.60 +1.4 2,773,670 - AZOBR_RS13145 0.60 -1.8 2,773,670 - AZOBR_RS13145 0.60 +1.1 2,773,670 - AZOBR_RS13145 0.60 +0.3
Or see this region's nucleotide sequence