Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS10695

Experiment: 2-pentyl-furan 1.335528 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS10690 and AZOBR_RS10695 are separated by 232 nucleotides AZOBR_RS10690: AZOBR_RS10690 - hypothetical protein, at 2,244,019 to 2,245,728 _RS10690 AZOBR_RS10695: AZOBR_RS10695 - potassium transporter TrkH, at 2,245,961 to 2,247,331 _RS10695 Position (kb) 2245 2246 2247 2248Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2245.019 kb on - strand, within AZOBR_RS10690at 2245.133 kb on - strand, within AZOBR_RS10690at 2245.321 kb on + strand, within AZOBR_RS10690at 2245.322 kb on - strand, within AZOBR_RS10690at 2245.465 kb on + strand, within AZOBR_RS10690at 2245.465 kb on + strand, within AZOBR_RS10690at 2245.465 kb on + strand, within AZOBR_RS10690at 2245.465 kb on + strand, within AZOBR_RS10690at 2245.465 kb on + strand, within AZOBR_RS10690at 2245.466 kb on - strandat 2245.466 kb on - strand, within AZOBR_RS10690at 2245.697 kb on - strandat 2246.183 kb on + strand, within AZOBR_RS10695at 2246.184 kb on - strand, within AZOBR_RS10695at 2246.184 kb on - strand, within AZOBR_RS10695at 2246.187 kb on - strand, within AZOBR_RS10695at 2246.187 kb on - strand, within AZOBR_RS10695at 2246.438 kb on + strand, within AZOBR_RS10695at 2246.439 kb on - strand, within AZOBR_RS10695at 2246.439 kb on - strand, within AZOBR_RS10695at 2246.439 kb on - strand, within AZOBR_RS10695at 2246.471 kb on + strand, within AZOBR_RS10695at 2246.471 kb on + strand, within AZOBR_RS10695at 2246.640 kb on - strand, within AZOBR_RS10695at 2246.742 kb on + strand, within AZOBR_RS10695at 2246.742 kb on + strand, within AZOBR_RS10695at 2246.892 kb on - strandat 2246.892 kb on - strand, within AZOBR_RS10695at 2246.892 kb on - strand, within AZOBR_RS10695at 2247.021 kb on - strand, within AZOBR_RS10695at 2247.021 kb on - strand, within AZOBR_RS10695

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM
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2,245,019 - AZOBR_RS10690 0.58 -0.4
2,245,133 - AZOBR_RS10690 0.65 +0.5
2,245,321 + AZOBR_RS10690 0.76 +0.3
2,245,322 - AZOBR_RS10690 0.76 +0.2
2,245,465 + AZOBR_RS10690 0.85 +0.7
2,245,465 + AZOBR_RS10690 0.85 -1.4
2,245,465 + AZOBR_RS10690 0.85 +1.0
2,245,465 + AZOBR_RS10690 0.85 -0.4
2,245,465 + AZOBR_RS10690 0.85 +0.3
2,245,466 - +0.8
2,245,466 - AZOBR_RS10690 0.85 -0.6
2,245,697 - -0.9
2,246,183 + AZOBR_RS10695 0.16 +0.3
2,246,184 - AZOBR_RS10695 0.16 -0.6
2,246,184 - AZOBR_RS10695 0.16 +0.5
2,246,187 - AZOBR_RS10695 0.16 +1.8
2,246,187 - AZOBR_RS10695 0.16 -0.2
2,246,438 + AZOBR_RS10695 0.35 -2.4
2,246,439 - AZOBR_RS10695 0.35 -1.3
2,246,439 - AZOBR_RS10695 0.35 -0.1
2,246,439 - AZOBR_RS10695 0.35 +0.4
2,246,471 + AZOBR_RS10695 0.37 +0.6
2,246,471 + AZOBR_RS10695 0.37 -2.1
2,246,640 - AZOBR_RS10695 0.50 -1.1
2,246,742 + AZOBR_RS10695 0.57 +1.3
2,246,742 + AZOBR_RS10695 0.57 -2.8
2,246,892 - -0.3
2,246,892 - AZOBR_RS10695 0.68 -0.4
2,246,892 - AZOBR_RS10695 0.68 -1.1
2,247,021 - AZOBR_RS10695 0.77 +1.3
2,247,021 - AZOBR_RS10695 0.77 +2.1

Or see this region's nucleotide sequence