Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10530 and AZOBR_RS10535 are separated by 92 nucleotides AZOBR_RS10535 and AZOBR_RS10540 are separated by 27 nucleotides AZOBR_RS10540 and AZOBR_RS10545 overlap by 4 nucleotides
AZOBR_RS10530: AZOBR_RS10530 - hypothetical protein, at 2,210,025 to 2,210,270
_RS10530
AZOBR_RS10535: AZOBR_RS10535 - GCN5 family N-acetyltransferase, at 2,210,363 to 2,210,953
_RS10535
AZOBR_RS10540: AZOBR_RS10540 - peptidase M16, at 2,210,981 to 2,212,237
_RS10540
AZOBR_RS10545: AZOBR_RS10545 - threonine synthase, at 2,212,234 to 2,213,646
_RS10545
Position (kb)
2210
2211
2212
2213 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2210.020 kb on - strand at 2210.022 kb on - strand at 2210.146 kb on + strand, within AZOBR_RS10530 at 2210.185 kb on + strand, within AZOBR_RS10530 at 2210.185 kb on + strand, within AZOBR_RS10530 at 2210.243 kb on + strand, within AZOBR_RS10530 at 2210.243 kb on + strand, within AZOBR_RS10530 at 2210.244 kb on - strand, within AZOBR_RS10530 at 2210.446 kb on - strand, within AZOBR_RS10535 at 2210.583 kb on + strand, within AZOBR_RS10535 at 2210.584 kb on - strand, within AZOBR_RS10535 at 2210.599 kb on - strand, within AZOBR_RS10535 at 2210.716 kb on - strand, within AZOBR_RS10535 at 2210.886 kb on + strand, within AZOBR_RS10535 at 2210.887 kb on - strand, within AZOBR_RS10535 at 2210.887 kb on - strand, within AZOBR_RS10535 at 2211.009 kb on + strand at 2211.009 kb on + strand at 2211.009 kb on + strand at 2211.151 kb on - strand, within AZOBR_RS10540 at 2211.384 kb on + strand, within AZOBR_RS10540 at 2211.384 kb on + strand, within AZOBR_RS10540 at 2211.384 kb on + strand, within AZOBR_RS10540 at 2211.384 kb on + strand, within AZOBR_RS10540 at 2211.385 kb on - strand, within AZOBR_RS10540 at 2211.385 kb on - strand, within AZOBR_RS10540 at 2211.393 kb on + strand, within AZOBR_RS10540 at 2211.393 kb on + strand, within AZOBR_RS10540 at 2211.394 kb on - strand, within AZOBR_RS10540 at 2211.481 kb on - strand, within AZOBR_RS10540 at 2211.714 kb on + strand, within AZOBR_RS10540 at 2211.975 kb on + strand, within AZOBR_RS10540 at 2211.979 kb on - strand, within AZOBR_RS10540 at 2212.001 kb on - strand, within AZOBR_RS10540 at 2212.001 kb on - strand, within AZOBR_RS10540 at 2212.002 kb on + strand, within AZOBR_RS10540
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,210,020 - -1.5 2,210,022 - +0.0 2,210,146 + AZOBR_RS10530 0.49 -2.6 2,210,185 + AZOBR_RS10530 0.65 -0.1 2,210,185 + AZOBR_RS10530 0.65 -0.8 2,210,243 + AZOBR_RS10530 0.89 -0.5 2,210,243 + AZOBR_RS10530 0.89 +1.3 2,210,244 - AZOBR_RS10530 0.89 -0.2 2,210,446 - AZOBR_RS10535 0.14 -0.3 2,210,583 + AZOBR_RS10535 0.37 -2.6 2,210,584 - AZOBR_RS10535 0.37 +0.7 2,210,599 - AZOBR_RS10535 0.40 -0.8 2,210,716 - AZOBR_RS10535 0.60 -0.6 2,210,886 + AZOBR_RS10535 0.88 -0.2 2,210,887 - AZOBR_RS10535 0.89 -2.3 2,210,887 - AZOBR_RS10535 0.89 +0.2 2,211,009 + +1.2 2,211,009 + +0.2 2,211,009 + -0.9 2,211,151 - AZOBR_RS10540 0.14 +0.1 2,211,384 + AZOBR_RS10540 0.32 -2.0 2,211,384 + AZOBR_RS10540 0.32 +0.8 2,211,384 + AZOBR_RS10540 0.32 -0.5 2,211,384 + AZOBR_RS10540 0.32 -3.1 2,211,385 - AZOBR_RS10540 0.32 +1.3 2,211,385 - AZOBR_RS10540 0.32 +1.0 2,211,393 + AZOBR_RS10540 0.33 -1.4 2,211,393 + AZOBR_RS10540 0.33 -0.3 2,211,394 - AZOBR_RS10540 0.33 -2.2 2,211,481 - AZOBR_RS10540 0.40 +1.2 2,211,714 + AZOBR_RS10540 0.58 -1.5 2,211,975 + AZOBR_RS10540 0.79 -0.0 2,211,979 - AZOBR_RS10540 0.79 -0.5 2,212,001 - AZOBR_RS10540 0.81 +0.7 2,212,001 - AZOBR_RS10540 0.81 +0.4 2,212,002 + AZOBR_RS10540 0.81 +0.7
Or see this region's nucleotide sequence