Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10510 and AZOBR_RS10515 are separated by 149 nucleotides AZOBR_RS10515 and AZOBR_RS10520 are separated by 29 nucleotides AZOBR_RS10520 and AZOBR_RS10525 are separated by 158 nucleotides AZOBR_RS10525 and AZOBR_RS10530 are separated by 73 nucleotides
AZOBR_RS10510: AZOBR_RS10510 - amP-dependent synthetase and ligase, at 2,204,873 to 2,206,471
_RS10510
AZOBR_RS10515: AZOBR_RS10515 - alkyl hydroperoxide reductase, at 2,206,621 to 2,207,103
_RS10515
AZOBR_RS10520: AZOBR_RS10520 - copper-resistance protein, at 2,207,133 to 2,209,217
_RS10520
AZOBR_RS10525: AZOBR_RS10525 - hypothetical protein, at 2,209,376 to 2,209,951
_RS10525
AZOBR_RS10530: AZOBR_RS10530 - hypothetical protein, at 2,210,025 to 2,210,270
_RS10530
Position (kb)
2207
2208
2209
2210 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2206.167 kb on - strand, within AZOBR_RS10510 at 2206.167 kb on - strand, within AZOBR_RS10510 at 2206.220 kb on + strand, within AZOBR_RS10510 at 2206.221 kb on - strand, within AZOBR_RS10510 at 2206.343 kb on + strand at 2206.456 kb on + strand at 2206.481 kb on + strand at 2206.481 kb on + strand at 2206.481 kb on + strand at 2206.481 kb on + strand at 2206.481 kb on + strand at 2206.482 kb on - strand at 2206.482 kb on - strand at 2206.482 kb on - strand at 2206.610 kb on + strand at 2206.623 kb on - strand at 2209.236 kb on - strand at 2209.272 kb on + strand at 2209.272 kb on + strand at 2209.272 kb on + strand at 2209.273 kb on - strand at 2209.273 kb on - strand at 2209.273 kb on - strand at 2209.273 kb on - strand at 2209.274 kb on + strand at 2209.275 kb on - strand at 2209.275 kb on - strand at 2209.362 kb on + strand at 2209.368 kb on + strand at 2209.369 kb on - strand at 2209.472 kb on + strand, within AZOBR_RS10525 at 2209.472 kb on + strand, within AZOBR_RS10525 at 2209.473 kb on - strand, within AZOBR_RS10525 at 2209.473 kb on - strand, within AZOBR_RS10525 at 2209.473 kb on - strand, within AZOBR_RS10525 at 2209.473 kb on - strand, within AZOBR_RS10525 at 2209.473 kb on - strand, within AZOBR_RS10525 at 2209.473 kb on - strand, within AZOBR_RS10525 at 2209.474 kb on + strand, within AZOBR_RS10525 at 2209.474 kb on + strand, within AZOBR_RS10525 at 2209.475 kb on - strand, within AZOBR_RS10525 at 2209.475 kb on - strand, within AZOBR_RS10525 at 2209.475 kb on - strand, within AZOBR_RS10525 at 2209.475 kb on - strand, within AZOBR_RS10525 at 2209.608 kb on - strand, within AZOBR_RS10525 at 2209.659 kb on - strand, within AZOBR_RS10525 at 2209.659 kb on - strand, within AZOBR_RS10525 at 2209.776 kb on - strand, within AZOBR_RS10525 at 2209.776 kb on - strand, within AZOBR_RS10525 at 2210.020 kb on - strand at 2210.022 kb on - strand at 2210.146 kb on + strand, within AZOBR_RS10530 at 2210.185 kb on + strand, within AZOBR_RS10530 at 2210.185 kb on + strand, within AZOBR_RS10530
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,206,167 - AZOBR_RS10510 0.81 -0.0 2,206,167 - AZOBR_RS10510 0.81 -0.3 2,206,220 + AZOBR_RS10510 0.84 -0.2 2,206,221 - AZOBR_RS10510 0.84 -2.5 2,206,343 + -0.5 2,206,456 + -0.4 2,206,481 + +0.7 2,206,481 + +0.2 2,206,481 + +0.8 2,206,481 + +0.6 2,206,481 + -0.5 2,206,482 - -0.7 2,206,482 - +1.5 2,206,482 - +0.4 2,206,610 + -2.0 2,206,623 - -0.6 2,209,236 - +1.2 2,209,272 + -1.0 2,209,272 + +0.8 2,209,272 + +0.4 2,209,273 - -2.8 2,209,273 - -1.5 2,209,273 - -1.1 2,209,273 - -0.2 2,209,274 + -0.9 2,209,275 - +0.1 2,209,275 - -0.9 2,209,362 + -2.0 2,209,368 + -0.3 2,209,369 - +0.3 2,209,472 + AZOBR_RS10525 0.17 -1.8 2,209,472 + AZOBR_RS10525 0.17 +0.6 2,209,473 - AZOBR_RS10525 0.17 +0.1 2,209,473 - AZOBR_RS10525 0.17 +0.7 2,209,473 - AZOBR_RS10525 0.17 -0.6 2,209,473 - AZOBR_RS10525 0.17 +0.1 2,209,473 - AZOBR_RS10525 0.17 +0.1 2,209,473 - AZOBR_RS10525 0.17 -0.0 2,209,474 + AZOBR_RS10525 0.17 -0.3 2,209,474 + AZOBR_RS10525 0.17 -2.6 2,209,475 - AZOBR_RS10525 0.17 -0.3 2,209,475 - AZOBR_RS10525 0.17 +1.5 2,209,475 - AZOBR_RS10525 0.17 -0.1 2,209,475 - AZOBR_RS10525 0.17 +0.3 2,209,608 - AZOBR_RS10525 0.40 +0.1 2,209,659 - AZOBR_RS10525 0.49 -1.0 2,209,659 - AZOBR_RS10525 0.49 +0.4 2,209,776 - AZOBR_RS10525 0.69 -3.1 2,209,776 - AZOBR_RS10525 0.69 -0.3 2,210,020 - -1.5 2,210,022 - +0.0 2,210,146 + AZOBR_RS10530 0.49 -2.6 2,210,185 + AZOBR_RS10530 0.65 -0.1 2,210,185 + AZOBR_RS10530 0.65 -0.8
Or see this region's nucleotide sequence