Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09145 and AZOBR_RS09150 are separated by 13 nucleotides AZOBR_RS09150 and AZOBR_RS09155 are separated by 96 nucleotides AZOBR_RS09155 and AZOBR_RS09160 are separated by 21 nucleotides AZOBR_RS09160 and AZOBR_RS09165 are separated by 422 nucleotides
AZOBR_RS09145: AZOBR_RS09145 - hypothetical protein, at 1,910,977 to 1,911,441
_RS09145
AZOBR_RS09150: AZOBR_RS09150 - peroxiredoxin, at 1,911,455 to 1,911,874
_RS09150
AZOBR_RS09155: AZOBR_RS09155 - short-chain dehydrogenase, at 1,911,971 to 1,913,002
_RS09155
AZOBR_RS09160: AZOBR_RS09160 - multidrug transporter, at 1,913,024 to 1,913,341
_RS09160
AZOBR_RS09165: AZOBR_RS09165 - hypothetical protein, at 1,913,764 to 1,914,048
_RS09165
Position (kb)
1911
1912
1913
1914 Strain fitness (log2 ratio)
-2
-1
0
1 at 1911.878 kb on + strand at 1911.878 kb on + strand at 1911.893 kb on + strand at 1911.894 kb on - strand at 1911.894 kb on - strand at 1912.331 kb on + strand, within AZOBR_RS09155 at 1912.331 kb on + strand, within AZOBR_RS09155 at 1912.332 kb on - strand, within AZOBR_RS09155 at 1912.332 kb on - strand, within AZOBR_RS09155 at 1912.332 kb on - strand, within AZOBR_RS09155 at 1912.332 kb on - strand, within AZOBR_RS09155 at 1912.452 kb on - strand, within AZOBR_RS09155 at 1912.743 kb on - strand, within AZOBR_RS09155 at 1913.167 kb on - strand, within AZOBR_RS09160 at 1913.446 kb on + strand at 1913.449 kb on - strand at 1913.449 kb on - strand at 1913.449 kb on - strand at 1913.449 kb on - strand at 1913.449 kb on - strand at 1913.449 kb on - strand at 1913.679 kb on + strand at 1913.868 kb on - strand, within AZOBR_RS09165 at 1913.868 kb on - strand, within AZOBR_RS09165
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,911,878 + -1.4 1,911,878 + +0.8 1,911,893 + -1.2 1,911,894 - -0.7 1,911,894 - -0.0 1,912,331 + AZOBR_RS09155 0.35 -1.3 1,912,331 + AZOBR_RS09155 0.35 +0.7 1,912,332 - AZOBR_RS09155 0.35 +0.2 1,912,332 - AZOBR_RS09155 0.35 +0.4 1,912,332 - AZOBR_RS09155 0.35 -0.1 1,912,332 - AZOBR_RS09155 0.35 +0.2 1,912,452 - AZOBR_RS09155 0.47 +0.4 1,912,743 - AZOBR_RS09155 0.75 -1.2 1,913,167 - AZOBR_RS09160 0.45 +0.1 1,913,446 + -1.4 1,913,449 - +1.4 1,913,449 - +1.2 1,913,449 - -0.4 1,913,449 - -1.8 1,913,449 - +0.1 1,913,449 - -0.8 1,913,679 + -0.4 1,913,868 - AZOBR_RS09165 0.36 +1.1 1,913,868 - AZOBR_RS09165 0.36 +1.7
Or see this region's nucleotide sequence