Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09125 and AZOBR_RS09130 are separated by 102 nucleotides AZOBR_RS09130 and AZOBR_RS09135 overlap by 32 nucleotides AZOBR_RS09135 and AZOBR_RS09140 are separated by 260 nucleotides
AZOBR_RS09125: AZOBR_RS09125 - hypothetical protein, at 1,906,517 to 1,907,905
_RS09125
AZOBR_RS09130: AZOBR_RS09130 - conserved membrane protein of unknown function, at 1,908,008 to 1,908,946
_RS09130
AZOBR_RS09135: AZOBR_RS09135 - GCN5 family acetyltransferase, at 1,908,915 to 1,909,355
_RS09135
AZOBR_RS09140: AZOBR_RS09140 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,909,616 to 1,910,920
_RS09140
Position (kb) 1908
1909 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1907.525 kb on + strand, within AZOBR_RS09125 at 1907.525 kb on + strand, within AZOBR_RS09125 at 1907.525 kb on + strand, within AZOBR_RS09125 at 1907.526 kb on - strand, within AZOBR_RS09125 at 1907.526 kb on - strand, within AZOBR_RS09125 at 1907.526 kb on - strand, within AZOBR_RS09125 at 1907.564 kb on + strand, within AZOBR_RS09125 at 1907.565 kb on - strand, within AZOBR_RS09125 at 1907.565 kb on - strand, within AZOBR_RS09125 at 1907.733 kb on + strand, within AZOBR_RS09125 at 1907.733 kb on + strand, within AZOBR_RS09125 at 1907.734 kb on - strand, within AZOBR_RS09125 at 1907.734 kb on - strand, within AZOBR_RS09125 at 1907.735 kb on + strand, within AZOBR_RS09125 at 1907.735 kb on + strand, within AZOBR_RS09125 at 1907.736 kb on - strand, within AZOBR_RS09125 at 1907.736 kb on - strand, within AZOBR_RS09125 at 1908.053 kb on + strand at 1908.054 kb on - strand at 1908.290 kb on + strand, within AZOBR_RS09130 at 1908.291 kb on - strand, within AZOBR_RS09130 at 1908.291 kb on - strand, within AZOBR_RS09130 at 1908.291 kb on - strand, within AZOBR_RS09130 at 1908.336 kb on - strand, within AZOBR_RS09130 at 1908.455 kb on + strand, within AZOBR_RS09130 at 1908.531 kb on - strand, within AZOBR_RS09130 at 1908.645 kb on - strand, within AZOBR_RS09130 at 1908.720 kb on - strand at 1908.729 kb on - strand, within AZOBR_RS09130 at 1909.015 kb on + strand, within AZOBR_RS09135 at 1909.040 kb on - strand, within AZOBR_RS09135 at 1909.045 kb on + strand, within AZOBR_RS09135 at 1909.046 kb on - strand, within AZOBR_RS09135 at 1909.046 kb on - strand, within AZOBR_RS09135 at 1909.150 kb on + strand, within AZOBR_RS09135 at 1909.151 kb on - strand, within AZOBR_RS09135 at 1909.151 kb on - strand, within AZOBR_RS09135 at 1909.159 kb on + strand, within AZOBR_RS09135 at 1909.159 kb on + strand, within AZOBR_RS09135 at 1909.396 kb on - strand at 1909.472 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,907,525 + AZOBR_RS09125 0.73 -0.0 1,907,525 + AZOBR_RS09125 0.73 +0.1 1,907,525 + AZOBR_RS09125 0.73 +0.9 1,907,526 - AZOBR_RS09125 0.73 +2.1 1,907,526 - AZOBR_RS09125 0.73 +2.1 1,907,526 - AZOBR_RS09125 0.73 +1.1 1,907,564 + AZOBR_RS09125 0.75 -2.0 1,907,565 - AZOBR_RS09125 0.75 +1.4 1,907,565 - AZOBR_RS09125 0.75 +0.6 1,907,733 + AZOBR_RS09125 0.88 -0.6 1,907,733 + AZOBR_RS09125 0.88 +0.3 1,907,734 - AZOBR_RS09125 0.88 +2.1 1,907,734 - AZOBR_RS09125 0.88 +0.6 1,907,735 + AZOBR_RS09125 0.88 +0.4 1,907,735 + AZOBR_RS09125 0.88 -0.1 1,907,736 - AZOBR_RS09125 0.88 +2.1 1,907,736 - AZOBR_RS09125 0.88 +0.6 1,908,053 + +0.2 1,908,054 - -0.8 1,908,290 + AZOBR_RS09130 0.30 -0.8 1,908,291 - AZOBR_RS09130 0.30 +0.9 1,908,291 - AZOBR_RS09130 0.30 +0.6 1,908,291 - AZOBR_RS09130 0.30 +0.8 1,908,336 - AZOBR_RS09130 0.35 -0.2 1,908,455 + AZOBR_RS09130 0.48 -0.0 1,908,531 - AZOBR_RS09130 0.56 +1.1 1,908,645 - AZOBR_RS09130 0.68 -1.0 1,908,720 - +0.6 1,908,729 - AZOBR_RS09130 0.77 -0.5 1,909,015 + AZOBR_RS09135 0.23 +0.9 1,909,040 - AZOBR_RS09135 0.28 +0.3 1,909,045 + AZOBR_RS09135 0.29 -0.6 1,909,046 - AZOBR_RS09135 0.30 -2.8 1,909,046 - AZOBR_RS09135 0.30 -0.9 1,909,150 + AZOBR_RS09135 0.53 -0.9 1,909,151 - AZOBR_RS09135 0.54 -3.2 1,909,151 - AZOBR_RS09135 0.54 +0.9 1,909,159 + AZOBR_RS09135 0.55 -0.2 1,909,159 + AZOBR_RS09135 0.55 -1.0 1,909,396 - +0.6 1,909,472 + +0.3
Or see this region's nucleotide sequence