Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS07870

Experiment: 2-pentyl-furan 1.335528 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt AZOBR_RS07870: AZOBR_RS07870 - tRNA-Glu, at 1,659,521 to 1,659,596 _RS07870 Position (kb) 1659 1660Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 1659.784 kb on - strandat 1659.897 kb on + strandat 1659.898 kb on - strandat 1659.898 kb on - strandat 1659.898 kb on - strandat 1659.993 kb on + strandat 1659.994 kb on - strandat 1659.994 kb on - strandat 1660.159 kb on + strandat 1660.159 kb on + strandat 1660.160 kb on - strandat 1660.160 kb on - strandat 1660.333 kb on + strandat 1660.334 kb on - strandat 1660.334 kb on - strandat 1660.361 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM
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1,659,784 - -2.2
1,659,897 + -2.0
1,659,898 - -0.9
1,659,898 - -1.2
1,659,898 - +3.0
1,659,993 + +1.1
1,659,994 - +0.6
1,659,994 - +4.4
1,660,159 + -3.8
1,660,159 + -0.5
1,660,160 - -0.5
1,660,160 - -0.6
1,660,333 + -0.0
1,660,334 - +0.3
1,660,334 - -0.4
1,660,361 - -2.0

Or see this region's nucleotide sequence