Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02080 and AZOBR_RS02085 are separated by 134 nucleotides
AZOBR_RS02080: AZOBR_RS02080 - multidrug transporter MurJ, at 424,188 to 425,762
_RS02080
AZOBR_RS02085: AZOBR_RS02085 - histidine kinase, at 425,897 to 428,401
_RS02085
Position (kb) 425
426
427
428
429 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 424.963 kb on + strand, within AZOBR_RS02080 at 424.963 kb on + strand, within AZOBR_RS02080 at 424.967 kb on - strand, within AZOBR_RS02080 at 424.967 kb on - strand, within AZOBR_RS02080 at 425.353 kb on + strand, within AZOBR_RS02080 at 426.243 kb on - strand, within AZOBR_RS02085 at 426.503 kb on + strand, within AZOBR_RS02085 at 426.698 kb on + strand, within AZOBR_RS02085 at 426.698 kb on + strand, within AZOBR_RS02085 at 426.698 kb on + strand, within AZOBR_RS02085 at 426.698 kb on + strand, within AZOBR_RS02085 at 426.698 kb on + strand, within AZOBR_RS02085 at 426.698 kb on + strand, within AZOBR_RS02085 at 426.699 kb on - strand, within AZOBR_RS02085 at 426.699 kb on - strand, within AZOBR_RS02085 at 426.791 kb on + strand, within AZOBR_RS02085 at 426.791 kb on + strand, within AZOBR_RS02085 at 426.791 kb on + strand, within AZOBR_RS02085 at 426.792 kb on - strand, within AZOBR_RS02085 at 426.792 kb on - strand, within AZOBR_RS02085 at 426.792 kb on - strand, within AZOBR_RS02085 at 426.792 kb on - strand, within AZOBR_RS02085 at 426.792 kb on - strand, within AZOBR_RS02085 at 426.974 kb on + strand, within AZOBR_RS02085 at 426.975 kb on - strand, within AZOBR_RS02085 at 427.701 kb on - strand, within AZOBR_RS02085 at 428.776 kb on + strand at 428.993 kb on + strand at 429.134 kb on + strand at 429.135 kb on - strand at 429.135 kb on - strand at 429.272 kb on + strand at 429.272 kb on + strand at 429.273 kb on - strand at 429.273 kb on - strand at 429.320 kb on + strand at 429.321 kb on - strand at 429.323 kb on + strand at 429.324 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 424,963 + AZOBR_RS02080 0.49 +0.6 424,963 + AZOBR_RS02080 0.49 -1.0 424,967 - AZOBR_RS02080 0.49 +0.3 424,967 - AZOBR_RS02080 0.49 -2.8 425,353 + AZOBR_RS02080 0.74 +0.5 426,243 - AZOBR_RS02085 0.14 -2.0 426,503 + AZOBR_RS02085 0.24 +0.3 426,698 + AZOBR_RS02085 0.32 -0.3 426,698 + AZOBR_RS02085 0.32 -1.8 426,698 + AZOBR_RS02085 0.32 -0.2 426,698 + AZOBR_RS02085 0.32 +0.5 426,698 + AZOBR_RS02085 0.32 -0.3 426,698 + AZOBR_RS02085 0.32 -0.7 426,699 - AZOBR_RS02085 0.32 -2.3 426,699 - AZOBR_RS02085 0.32 -1.7 426,791 + AZOBR_RS02085 0.36 +0.2 426,791 + AZOBR_RS02085 0.36 -0.9 426,791 + AZOBR_RS02085 0.36 +2.6 426,792 - AZOBR_RS02085 0.36 +1.0 426,792 - AZOBR_RS02085 0.36 +0.4 426,792 - AZOBR_RS02085 0.36 +0.0 426,792 - AZOBR_RS02085 0.36 -0.3 426,792 - AZOBR_RS02085 0.36 +1.2 426,974 + AZOBR_RS02085 0.43 +0.9 426,975 - AZOBR_RS02085 0.43 -2.1 427,701 - AZOBR_RS02085 0.72 -0.4 428,776 + -0.0 428,993 + -1.6 429,134 + -1.2 429,135 - +0.5 429,135 - -1.5 429,272 + -0.7 429,272 + +0.1 429,273 - +0.7 429,273 - +0.4 429,320 + -1.9 429,321 - +0.3 429,323 + +0.1 429,324 - -1.4
Or see this region's nucleotide sequence