Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02025 and AZOBR_RS02030 are separated by 234 nucleotides AZOBR_RS02030 and AZOBR_RS02035 are separated by 209 nucleotides
AZOBR_RS02025: AZOBR_RS02025 - transporter, at 414,183 to 415,673
_RS02025
AZOBR_RS02030: AZOBR_RS02030 - hypothetical protein, at 415,908 to 417,062
_RS02030
AZOBR_RS02035: AZOBR_RS02035 - 3-ketoacyl-ACP reductase, at 417,272 to 418,024
_RS02035
Position (kb) 415
416
417
418 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 414.974 kb on - strand, within AZOBR_RS02025 at 415.021 kb on - strand, within AZOBR_RS02025 at 416.026 kb on + strand, within AZOBR_RS02030 at 416.050 kb on + strand, within AZOBR_RS02030 at 416.050 kb on + strand, within AZOBR_RS02030 at 416.051 kb on - strand, within AZOBR_RS02030 at 416.182 kb on + strand, within AZOBR_RS02030 at 416.425 kb on + strand, within AZOBR_RS02030 at 416.425 kb on + strand, within AZOBR_RS02030 at 416.426 kb on - strand, within AZOBR_RS02030 at 416.426 kb on - strand, within AZOBR_RS02030 at 416.629 kb on + strand, within AZOBR_RS02030 at 416.638 kb on + strand, within AZOBR_RS02030 at 416.638 kb on + strand, within AZOBR_RS02030 at 416.638 kb on + strand, within AZOBR_RS02030 at 416.639 kb on - strand, within AZOBR_RS02030 at 416.639 kb on - strand, within AZOBR_RS02030 at 416.639 kb on - strand, within AZOBR_RS02030 at 416.639 kb on - strand, within AZOBR_RS02030 at 416.812 kb on + strand, within AZOBR_RS02030 at 416.812 kb on + strand, within AZOBR_RS02030 at 416.813 kb on - strand, within AZOBR_RS02030 at 416.813 kb on - strand, within AZOBR_RS02030 at 416.813 kb on - strand, within AZOBR_RS02030 at 416.813 kb on - strand, within AZOBR_RS02030 at 416.884 kb on + strand, within AZOBR_RS02030 at 416.885 kb on - strand, within AZOBR_RS02030 at 416.885 kb on - strand, within AZOBR_RS02030 at 416.885 kb on - strand, within AZOBR_RS02030 at 416.885 kb on - strand, within AZOBR_RS02030 at 416.887 kb on + strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.888 kb on - strand, within AZOBR_RS02030 at 416.941 kb on + strand, within AZOBR_RS02030 at 416.942 kb on - strand, within AZOBR_RS02030 at 416.942 kb on - strand, within AZOBR_RS02030 at 416.942 kb on - strand, within AZOBR_RS02030 at 417.549 kb on + strand, within AZOBR_RS02035 at 417.549 kb on + strand, within AZOBR_RS02035 at 417.549 kb on + strand, within AZOBR_RS02035 at 417.550 kb on - strand, within AZOBR_RS02035 at 417.903 kb on + strand, within AZOBR_RS02035 at 417.903 kb on + strand, within AZOBR_RS02035 at 418.062 kb on + strand at 418.062 kb on + strand at 418.062 kb on + strand at 418.062 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 414,974 - AZOBR_RS02025 0.53 -0.7 415,021 - AZOBR_RS02025 0.56 -0.9 416,026 + AZOBR_RS02030 0.10 +0.7 416,050 + AZOBR_RS02030 0.12 -1.0 416,050 + AZOBR_RS02030 0.12 -0.1 416,051 - AZOBR_RS02030 0.12 +0.9 416,182 + AZOBR_RS02030 0.24 +0.8 416,425 + AZOBR_RS02030 0.45 +0.8 416,425 + AZOBR_RS02030 0.45 +0.3 416,426 - AZOBR_RS02030 0.45 +0.1 416,426 - AZOBR_RS02030 0.45 -0.8 416,629 + AZOBR_RS02030 0.62 -2.8 416,638 + AZOBR_RS02030 0.63 +0.5 416,638 + AZOBR_RS02030 0.63 -0.8 416,638 + AZOBR_RS02030 0.63 -1.1 416,639 - AZOBR_RS02030 0.63 -0.2 416,639 - AZOBR_RS02030 0.63 +0.7 416,639 - AZOBR_RS02030 0.63 -0.4 416,639 - AZOBR_RS02030 0.63 +0.9 416,812 + AZOBR_RS02030 0.78 -0.9 416,812 + AZOBR_RS02030 0.78 -0.3 416,813 - AZOBR_RS02030 0.78 -3.1 416,813 - AZOBR_RS02030 0.78 +0.6 416,813 - AZOBR_RS02030 0.78 -0.2 416,813 - AZOBR_RS02030 0.78 -0.6 416,884 + AZOBR_RS02030 0.85 -2.5 416,885 - AZOBR_RS02030 0.85 -1.0 416,885 - AZOBR_RS02030 0.85 +1.4 416,885 - AZOBR_RS02030 0.85 -0.2 416,885 - AZOBR_RS02030 0.85 +0.0 416,887 + AZOBR_RS02030 0.85 +0.7 416,888 - AZOBR_RS02030 0.85 +0.8 416,888 - AZOBR_RS02030 0.85 +1.0 416,888 - AZOBR_RS02030 0.85 -1.1 416,888 - AZOBR_RS02030 0.85 -0.8 416,888 - AZOBR_RS02030 0.85 -3.5 416,888 - AZOBR_RS02030 0.85 +0.8 416,888 - AZOBR_RS02030 0.85 +0.5 416,941 + AZOBR_RS02030 0.89 +0.3 416,942 - AZOBR_RS02030 0.90 +0.4 416,942 - AZOBR_RS02030 0.90 +0.8 416,942 - AZOBR_RS02030 0.90 +1.3 417,549 + AZOBR_RS02035 0.37 -2.1 417,549 + AZOBR_RS02035 0.37 -2.1 417,549 + AZOBR_RS02035 0.37 -2.5 417,550 - AZOBR_RS02035 0.37 -1.9 417,903 + AZOBR_RS02035 0.84 -0.7 417,903 + AZOBR_RS02035 0.84 +1.3 418,062 + +0.0 418,062 + -1.3 418,062 + -0.4 418,062 + -0.2
Or see this region's nucleotide sequence