Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS11330 and AZOBR_RS11335 are separated by 131 nucleotides AZOBR_RS11335 and AZOBR_RS11340 are separated by 10 nucleotides AZOBR_RS11340 and AZOBR_RS11345 are separated by 172 nucleotides
AZOBR_RS11330: AZOBR_RS11330 - two-component sensor histidine kinase, at 2,380,151 to 2,382,010
_RS11330
AZOBR_RS11335: AZOBR_RS11335 - alpha/beta hydrolase, at 2,382,142 to 2,382,939
_RS11335
AZOBR_RS11340: AZOBR_RS11340 - O-acetylhomoserine aminocarboxypropyltransferase, at 2,382,950 to 2,384,260
_RS11340
AZOBR_RS11345: AZOBR_RS11345 - carboxylate-amine ligase, at 2,384,433 to 2,385,563
_RS11345
Position (kb)
2382
2383
2384
2385 Strain fitness (log2 ratio)
-2
-1
0
1 at 2382.144 kb on - strand at 2382.207 kb on + strand at 2382.289 kb on - strand, within AZOBR_RS11335 at 2382.359 kb on + strand, within AZOBR_RS11335 at 2382.359 kb on + strand, within AZOBR_RS11335 at 2382.360 kb on - strand, within AZOBR_RS11335 at 2382.360 kb on - strand, within AZOBR_RS11335 at 2383.317 kb on + strand, within AZOBR_RS11340 at 2383.495 kb on - strand, within AZOBR_RS11340 at 2383.686 kb on + strand, within AZOBR_RS11340 at 2383.687 kb on - strand, within AZOBR_RS11340 at 2384.088 kb on + strand, within AZOBR_RS11340 at 2384.088 kb on + strand, within AZOBR_RS11340 at 2384.088 kb on + strand, within AZOBR_RS11340 at 2384.088 kb on + strand, within AZOBR_RS11340 at 2384.088 kb on + strand, within AZOBR_RS11340 at 2384.089 kb on - strand, within AZOBR_RS11340 at 2384.089 kb on - strand, within AZOBR_RS11340 at 2384.152 kb on - strand at 2384.152 kb on - strand at 2384.152 kb on - strand at 2384.166 kb on + strand at 2384.166 kb on + strand at 2384.166 kb on + strand at 2384.166 kb on + strand at 2384.167 kb on - strand at 2384.282 kb on - strand at 2384.282 kb on - strand at 2384.527 kb on + strand at 2384.527 kb on + strand at 2384.527 kb on + strand at 2384.527 kb on + strand at 2384.528 kb on - strand at 2384.528 kb on - strand at 2384.710 kb on + strand, within AZOBR_RS11345 at 2384.755 kb on + strand, within AZOBR_RS11345 at 2384.756 kb on - strand, within AZOBR_RS11345 at 2385.119 kb on - strand, within AZOBR_RS11345 at 2385.119 kb on - strand, within AZOBR_RS11345 at 2385.238 kb on + strand, within AZOBR_RS11345
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,382,144 - +0.1 2,382,207 + -2.0 2,382,289 - AZOBR_RS11335 0.18 +0.4 2,382,359 + AZOBR_RS11335 0.27 -0.3 2,382,359 + AZOBR_RS11335 0.27 +0.9 2,382,360 - AZOBR_RS11335 0.27 +0.0 2,382,360 - AZOBR_RS11335 0.27 +0.0 2,383,317 + AZOBR_RS11340 0.28 -2.4 2,383,495 - AZOBR_RS11340 0.42 -1.2 2,383,686 + AZOBR_RS11340 0.56 -0.9 2,383,687 - AZOBR_RS11340 0.56 +0.6 2,384,088 + AZOBR_RS11340 0.87 +0.1 2,384,088 + AZOBR_RS11340 0.87 -0.3 2,384,088 + AZOBR_RS11340 0.87 -0.6 2,384,088 + AZOBR_RS11340 0.87 -0.8 2,384,088 + AZOBR_RS11340 0.87 -0.3 2,384,089 - AZOBR_RS11340 0.87 +1.3 2,384,089 - AZOBR_RS11340 0.87 +0.2 2,384,152 - -2.2 2,384,152 - +0.1 2,384,152 - -0.3 2,384,166 + +0.0 2,384,166 + +1.2 2,384,166 + -0.7 2,384,166 + -2.0 2,384,167 - +1.2 2,384,282 - -0.3 2,384,282 - +0.5 2,384,527 + +0.3 2,384,527 + -1.1 2,384,527 + +0.8 2,384,527 + +1.1 2,384,528 - -0.3 2,384,528 - -0.1 2,384,710 + AZOBR_RS11345 0.24 +0.3 2,384,755 + AZOBR_RS11345 0.28 -0.3 2,384,756 - AZOBR_RS11345 0.29 -0.2 2,385,119 - AZOBR_RS11345 0.61 +0.8 2,385,119 - AZOBR_RS11345 0.61 -0.7 2,385,238 + AZOBR_RS11345 0.71 -0.4
Or see this region's nucleotide sequence