Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30625 and AZOBR_RS30630 are separated by 133 nucleotides AZOBR_RS30630 and AZOBR_RS30635 are separated by 111 nucleotides AZOBR_RS30635 and AZOBR_RS30640 overlap by 38 nucleotides
AZOBR_RS30625: AZOBR_RS30625 - MFS transporter, at 226,798 to 228,033
_RS30625
AZOBR_RS30630: AZOBR_RS30630 - transcriptional regulator, at 228,167 to 229,102
_RS30630
AZOBR_RS30635: AZOBR_RS30635 - phosphohydrolase, at 229,214 to 229,675
_RS30635
AZOBR_RS30640: AZOBR_RS30640 - hypothetical protein, at 229,638 to 230,405
_RS30640
Position (kb) 228
229
230 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.213 kb on + strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.214 kb on - strand, within AZOBR_RS30625 at 227.295 kb on - strand, within AZOBR_RS30625 at 227.366 kb on + strand, within AZOBR_RS30625 at 227.366 kb on + strand, within AZOBR_RS30625 at 227.367 kb on - strand, within AZOBR_RS30625 at 227.367 kb on - strand, within AZOBR_RS30625 at 228.122 kb on + strand at 229.162 kb on - strand at 229.162 kb on - strand at 229.503 kb on - strand, within AZOBR_RS30635 at 229.508 kb on + strand, within AZOBR_RS30635 at 229.508 kb on + strand, within AZOBR_RS30635 at 229.508 kb on + strand, within AZOBR_RS30635 at 229.509 kb on - strand, within AZOBR_RS30635 at 229.509 kb on - strand, within AZOBR_RS30635 at 229.717 kb on + strand, within AZOBR_RS30640 at 229.717 kb on + strand, within AZOBR_RS30640 at 229.718 kb on - strand, within AZOBR_RS30640 at 229.754 kb on - strand, within AZOBR_RS30640 at 229.936 kb on + strand, within AZOBR_RS30640 at 229.936 kb on + strand, within AZOBR_RS30640 at 229.937 kb on - strand, within AZOBR_RS30640 at 229.937 kb on - strand, within AZOBR_RS30640 at 229.937 kb on - strand, within AZOBR_RS30640
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 227,213 + AZOBR_RS30625 0.34 -1.5 227,213 + AZOBR_RS30625 0.34 -0.6 227,213 + AZOBR_RS30625 0.34 -3.7 227,213 + AZOBR_RS30625 0.34 -1.5 227,213 + AZOBR_RS30625 0.34 +0.9 227,213 + AZOBR_RS30625 0.34 -0.2 227,213 + AZOBR_RS30625 0.34 -0.3 227,213 + AZOBR_RS30625 0.34 -0.3 227,213 + AZOBR_RS30625 0.34 -0.3 227,213 + AZOBR_RS30625 0.34 -1.5 227,213 + AZOBR_RS30625 0.34 +0.1 227,214 - AZOBR_RS30625 0.34 +0.5 227,214 - AZOBR_RS30625 0.34 +1.0 227,214 - AZOBR_RS30625 0.34 +0.5 227,214 - AZOBR_RS30625 0.34 -0.2 227,295 - AZOBR_RS30625 0.40 +0.6 227,366 + AZOBR_RS30625 0.46 -1.2 227,366 + AZOBR_RS30625 0.46 -0.2 227,367 - AZOBR_RS30625 0.46 +0.8 227,367 - AZOBR_RS30625 0.46 +0.1 228,122 + -0.9 229,162 - -0.2 229,162 - -0.5 229,503 - AZOBR_RS30635 0.63 +0.7 229,508 + AZOBR_RS30635 0.64 +0.1 229,508 + AZOBR_RS30635 0.64 -0.2 229,508 + AZOBR_RS30635 0.64 +0.2 229,509 - AZOBR_RS30635 0.64 +1.0 229,509 - AZOBR_RS30635 0.64 +0.3 229,717 + AZOBR_RS30640 0.10 +1.8 229,717 + AZOBR_RS30640 0.10 -0.2 229,718 - AZOBR_RS30640 0.10 -1.9 229,754 - AZOBR_RS30640 0.15 +0.2 229,936 + AZOBR_RS30640 0.39 +1.4 229,936 + AZOBR_RS30640 0.39 +0.1 229,937 - AZOBR_RS30640 0.39 +0.1 229,937 - AZOBR_RS30640 0.39 +0.7 229,937 - AZOBR_RS30640 0.39 -0.2
Or see this region's nucleotide sequence