Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30245 and AZOBR_RS30250 are separated by 193 nucleotides AZOBR_RS30250 and AZOBR_RS30255 are separated by 202 nucleotides AZOBR_RS30255 and AZOBR_RS30260 are separated by 343 nucleotides
AZOBR_RS30245: AZOBR_RS30245 - glyceraldehyde-3-phosphate dehydrogenase, at 131,140 to 131,621
_RS30245
AZOBR_RS30250: AZOBR_RS30250 - tRNA-Met, at 131,815 to 131,891
_RS30250
AZOBR_RS30255: AZOBR_RS30255 - hypothetical protein, at 132,094 to 132,276
_RS30255
AZOBR_RS30260: AZOBR_RS30260 - hypothetical protein, at 132,620 to 135,967
_RS30260
Position (kb) 132
133 Strain fitness (log2 ratio) -2
-1
0
1 at 131.142 kb on - strand at 131.142 kb on - strand at 131.142 kb on - strand at 132.158 kb on + strand, within AZOBR_RS30255 at 132.158 kb on + strand, within AZOBR_RS30255 at 132.158 kb on + strand, within AZOBR_RS30255 at 132.158 kb on + strand, within AZOBR_RS30255 at 132.158 kb on + strand, within AZOBR_RS30255 at 132.159 kb on - strand, within AZOBR_RS30255 at 132.159 kb on - strand, within AZOBR_RS30255 at 132.159 kb on - strand, within AZOBR_RS30255 at 132.159 kb on - strand, within AZOBR_RS30255 at 132.240 kb on - strand, within AZOBR_RS30255 at 132.281 kb on + strand at 132.281 kb on + strand at 132.400 kb on + strand at 132.401 kb on - strand at 132.401 kb on - strand at 132.401 kb on - strand at 132.401 kb on - strand at 132.430 kb on + strand at 132.431 kb on - strand at 132.431 kb on - strand at 132.553 kb on + strand at 132.553 kb on + strand at 132.554 kb on - strand at 132.554 kb on - strand at 132.567 kb on - strand at 132.605 kb on + strand at 132.621 kb on + strand at 132.622 kb on - strand at 132.622 kb on - strand at 132.622 kb on - strand at 132.622 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 131,142 - +1.2 131,142 - -0.4 131,142 - +0.8 132,158 + AZOBR_RS30255 0.35 -0.2 132,158 + AZOBR_RS30255 0.35 -0.7 132,158 + AZOBR_RS30255 0.35 -0.0 132,158 + AZOBR_RS30255 0.35 +0.8 132,158 + AZOBR_RS30255 0.35 -0.5 132,159 - AZOBR_RS30255 0.36 +1.1 132,159 - AZOBR_RS30255 0.36 +0.5 132,159 - AZOBR_RS30255 0.36 +0.5 132,159 - AZOBR_RS30255 0.36 -2.3 132,240 - AZOBR_RS30255 0.80 +0.8 132,281 + -0.4 132,281 + +0.6 132,400 + -0.0 132,401 - -0.3 132,401 - -0.3 132,401 - -0.8 132,401 - -1.0 132,430 + -0.3 132,431 - -0.3 132,431 - +0.4 132,553 + +0.4 132,553 + -0.3 132,554 - +0.5 132,554 - -1.0 132,567 - +0.7 132,605 + +1.1 132,621 + +0.3 132,622 - +0.5 132,622 - -1.5 132,622 - -0.2 132,622 - -0.5
Or see this region's nucleotide sequence