Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29625 and AZOBR_RS29630 are separated by 121 nucleotides AZOBR_RS29630 and AZOBR_RS26115 are separated by 132 nucleotides
AZOBR_RS29625: AZOBR_RS29625 - agmatinase, at 775,717 to 776,787
_RS29625
AZOBR_RS29630: AZOBR_RS29630 - amidase hydantoinase/carbamoylase family, at 776,909 to 778,102
_RS29630
AZOBR_RS26115: AZOBR_RS26115 - hypothetical protein, at 778,235 to 778,804
_RS26115
Position (kb) 776
777
778
779 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 775.981 kb on + strand, within AZOBR_RS29625 at 775.981 kb on + strand, within AZOBR_RS29625 at 775.982 kb on - strand, within AZOBR_RS29625 at 776.033 kb on - strand, within AZOBR_RS29625 at 776.065 kb on + strand, within AZOBR_RS29625 at 776.065 kb on + strand, within AZOBR_RS29625 at 776.066 kb on - strand, within AZOBR_RS29625 at 776.185 kb on + strand, within AZOBR_RS29625 at 776.186 kb on - strand, within AZOBR_RS29625 at 776.347 kb on + strand, within AZOBR_RS29625 at 776.347 kb on + strand, within AZOBR_RS29625 at 776.347 kb on + strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.348 kb on - strand, within AZOBR_RS29625 at 776.417 kb on - strand, within AZOBR_RS29625 at 776.417 kb on - strand, within AZOBR_RS29625 at 776.507 kb on - strand, within AZOBR_RS29625 at 776.527 kb on + strand, within AZOBR_RS29625 at 776.527 kb on + strand, within AZOBR_RS29625 at 776.528 kb on - strand, within AZOBR_RS29625 at 776.620 kb on + strand, within AZOBR_RS29625 at 776.620 kb on + strand, within AZOBR_RS29625 at 776.620 kb on + strand, within AZOBR_RS29625 at 776.621 kb on - strand, within AZOBR_RS29625 at 776.710 kb on + strand at 776.710 kb on + strand at 776.726 kb on - strand at 776.737 kb on + strand at 776.737 kb on + strand at 776.737 kb on + strand at 776.738 kb on - strand at 776.738 kb on - strand at 776.738 kb on - strand at 776.851 kb on + strand at 776.851 kb on + strand at 776.851 kb on + strand at 776.851 kb on + strand at 776.852 kb on - strand at 777.093 kb on - strand, within AZOBR_RS29630 at 777.590 kb on + strand, within AZOBR_RS29630 at 778.154 kb on - strand at 778.652 kb on + strand, within AZOBR_RS26115 at 778.652 kb on + strand, within AZOBR_RS26115 at 778.653 kb on - strand, within AZOBR_RS26115 at 778.653 kb on - strand, within AZOBR_RS26115 at 778.653 kb on - strand, within AZOBR_RS26115 at 778.653 kb on - strand, within AZOBR_RS26115
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 775,981 + AZOBR_RS29625 0.25 -1.0 775,981 + AZOBR_RS29625 0.25 -1.2 775,982 - AZOBR_RS29625 0.25 +0.3 776,033 - AZOBR_RS29625 0.30 -0.0 776,065 + AZOBR_RS29625 0.32 -0.4 776,065 + AZOBR_RS29625 0.32 +1.1 776,066 - AZOBR_RS29625 0.33 +0.1 776,185 + AZOBR_RS29625 0.44 +1.1 776,186 - AZOBR_RS29625 0.44 +0.6 776,347 + AZOBR_RS29625 0.59 -1.4 776,347 + AZOBR_RS29625 0.59 +0.4 776,347 + AZOBR_RS29625 0.59 -0.2 776,348 - AZOBR_RS29625 0.59 -0.1 776,348 - AZOBR_RS29625 0.59 +0.6 776,348 - AZOBR_RS29625 0.59 -0.6 776,348 - AZOBR_RS29625 0.59 -0.6 776,348 - AZOBR_RS29625 0.59 -0.2 776,417 - AZOBR_RS29625 0.65 -0.7 776,417 - AZOBR_RS29625 0.65 +0.2 776,507 - AZOBR_RS29625 0.74 -0.1 776,527 + AZOBR_RS29625 0.76 -0.1 776,527 + AZOBR_RS29625 0.76 -0.3 776,528 - AZOBR_RS29625 0.76 +1.8 776,620 + AZOBR_RS29625 0.84 -1.0 776,620 + AZOBR_RS29625 0.84 -1.0 776,620 + AZOBR_RS29625 0.84 -0.5 776,621 - AZOBR_RS29625 0.84 -1.0 776,710 + -0.0 776,710 + -1.3 776,726 - -0.6 776,737 + -2.8 776,737 + +0.2 776,737 + +0.5 776,738 - -1.0 776,738 - -0.4 776,738 - -1.4 776,851 + -0.1 776,851 + +0.4 776,851 + +0.2 776,851 + -0.0 776,852 - -0.9 777,093 - AZOBR_RS29630 0.15 +0.0 777,590 + AZOBR_RS29630 0.57 -2.9 778,154 - -0.2 778,652 + AZOBR_RS26115 0.73 +0.4 778,652 + AZOBR_RS26115 0.73 -0.7 778,653 - AZOBR_RS26115 0.73 +1.8 778,653 - AZOBR_RS26115 0.73 +0.2 778,653 - AZOBR_RS26115 0.73 +0.8 778,653 - AZOBR_RS26115 0.73 -0.3
Or see this region's nucleotide sequence