Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14090 and AZOBR_RS14095 are separated by 86 nucleotides
AZOBR_RS14090: AZOBR_RS14090 - putative Diguanylate cyclase yddV, at 2,964,649 to 2,966,028
_RS14090
AZOBR_RS14095: AZOBR_RS14095 - ATPase, at 2,966,115 to 2,967,269
_RS14095
Position (kb)
2964
2965
2966
2967 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2963.809 kb on + strand at 2963.809 kb on + strand at 2963.809 kb on + strand at 2963.809 kb on + strand at 2963.809 kb on + strand at 2963.810 kb on - strand at 2963.810 kb on - strand at 2963.810 kb on - strand at 2963.810 kb on - strand at 2963.896 kb on + strand at 2964.473 kb on + strand at 2964.473 kb on + strand at 2964.474 kb on - strand at 2964.474 kb on - strand at 2964.519 kb on + strand at 2964.537 kb on - strand at 2964.788 kb on - strand, within AZOBR_RS14090 at 2965.099 kb on - strand, within AZOBR_RS14090 at 2965.127 kb on - strand, within AZOBR_RS14090 at 2965.265 kb on - strand, within AZOBR_RS14090 at 2965.265 kb on - strand, within AZOBR_RS14090 at 2965.265 kb on - strand, within AZOBR_RS14090 at 2965.265 kb on - strand, within AZOBR_RS14090 at 2965.492 kb on + strand, within AZOBR_RS14090 at 2965.492 kb on + strand, within AZOBR_RS14090 at 2965.492 kb on + strand, within AZOBR_RS14090 at 2965.493 kb on - strand, within AZOBR_RS14090 at 2965.493 kb on - strand, within AZOBR_RS14090 at 2966.082 kb on + strand at 2966.082 kb on + strand at 2966.082 kb on + strand at 2966.082 kb on + strand at 2966.083 kb on - strand at 2966.140 kb on - strand at 2966.217 kb on + strand at 2966.236 kb on - strand, within AZOBR_RS14095 at 2966.343 kb on + strand, within AZOBR_RS14095 at 2966.343 kb on + strand, within AZOBR_RS14095 at 2966.349 kb on + strand, within AZOBR_RS14095 at 2966.349 kb on + strand, within AZOBR_RS14095 at 2966.349 kb on + strand, within AZOBR_RS14095 at 2966.350 kb on - strand, within AZOBR_RS14095 at 2966.350 kb on - strand, within AZOBR_RS14095 at 2966.350 kb on - strand, within AZOBR_RS14095 at 2966.688 kb on + strand, within AZOBR_RS14095 at 2966.688 kb on + strand, within AZOBR_RS14095 at 2966.688 kb on + strand, within AZOBR_RS14095 at 2966.689 kb on - strand, within AZOBR_RS14095 at 2966.689 kb on - strand, within AZOBR_RS14095 at 2966.814 kb on + strand, within AZOBR_RS14095 at 2966.815 kb on - strand, within AZOBR_RS14095 at 2967.006 kb on + strand, within AZOBR_RS14095 at 2967.007 kb on - strand, within AZOBR_RS14095
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 2,963,809 + -0.4 2,963,809 + -1.2 2,963,809 + +0.4 2,963,809 + +0.1 2,963,809 + -4.0 2,963,810 - -0.1 2,963,810 - -1.9 2,963,810 - +0.2 2,963,810 - -0.2 2,963,896 + -0.1 2,964,473 + +1.2 2,964,473 + -0.2 2,964,474 - -0.9 2,964,474 - +0.0 2,964,519 + -0.5 2,964,537 - +0.4 2,964,788 - AZOBR_RS14090 0.10 -2.2 2,965,099 - AZOBR_RS14090 0.33 -0.6 2,965,127 - AZOBR_RS14090 0.35 +0.2 2,965,265 - AZOBR_RS14090 0.45 +1.1 2,965,265 - AZOBR_RS14090 0.45 -0.0 2,965,265 - AZOBR_RS14090 0.45 +1.1 2,965,265 - AZOBR_RS14090 0.45 +0.1 2,965,492 + AZOBR_RS14090 0.61 +0.3 2,965,492 + AZOBR_RS14090 0.61 +0.3 2,965,492 + AZOBR_RS14090 0.61 +0.7 2,965,493 - AZOBR_RS14090 0.61 -1.0 2,965,493 - AZOBR_RS14090 0.61 -0.6 2,966,082 + -0.5 2,966,082 + -0.2 2,966,082 + -0.3 2,966,082 + +0.2 2,966,083 - -0.1 2,966,140 - +1.8 2,966,217 + -0.6 2,966,236 - AZOBR_RS14095 0.10 -0.3 2,966,343 + AZOBR_RS14095 0.20 -0.7 2,966,343 + AZOBR_RS14095 0.20 -3.5 2,966,349 + AZOBR_RS14095 0.20 +0.3 2,966,349 + AZOBR_RS14095 0.20 -0.2 2,966,349 + AZOBR_RS14095 0.20 -2.5 2,966,350 - AZOBR_RS14095 0.20 +0.2 2,966,350 - AZOBR_RS14095 0.20 -1.6 2,966,350 - AZOBR_RS14095 0.20 -1.1 2,966,688 + AZOBR_RS14095 0.50 -0.4 2,966,688 + AZOBR_RS14095 0.50 -0.3 2,966,688 + AZOBR_RS14095 0.50 +0.2 2,966,689 - AZOBR_RS14095 0.50 -1.0 2,966,689 - AZOBR_RS14095 0.50 +0.6 2,966,814 + AZOBR_RS14095 0.61 -0.6 2,966,815 - AZOBR_RS14095 0.61 -2.1 2,967,006 + AZOBR_RS14095 0.77 -1.6 2,967,007 - AZOBR_RS14095 0.77 -0.7
Or see this region's nucleotide sequence