Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08665 and AZOBR_RS08670 are separated by 22 nucleotides AZOBR_RS08670 and AZOBR_RS08675 are separated by 141 nucleotides AZOBR_RS08675 and AZOBR_RS08680 are separated by 55 nucleotides AZOBR_RS08680 and AZOBR_RS08685 are separated by 52 nucleotides
AZOBR_RS08665: AZOBR_RS08665 - amino acid ABC transporter permease, at 1,814,671 to 1,815,774
_RS08665
AZOBR_RS08670: AZOBR_RS08670 - arginine ABC transporter ATP-binding protein, at 1,815,797 to 1,816,573
_RS08670
AZOBR_RS08675: AZOBR_RS08675 - histidinol phosphate aminotransferase, at 1,816,715 to 1,817,800
_RS08675
AZOBR_RS08680: AZOBR_RS08680 - multidrug DMT transporter permease, at 1,817,856 to 1,818,689
_RS08680
AZOBR_RS08685: AZOBR_RS08685 - GNAT family acetyltransferase, at 1,818,742 to 1,819,383
_RS08685
Position (kb) 1816
1817
1818 Strain fitness (log2 ratio) -2
-1
0
1 at 1815.728 kb on - strand at 1815.728 kb on - strand at 1815.876 kb on - strand, within AZOBR_RS08670 at 1816.090 kb on - strand, within AZOBR_RS08670 at 1816.090 kb on - strand, within AZOBR_RS08670 at 1816.241 kb on + strand, within AZOBR_RS08670 at 1816.242 kb on - strand, within AZOBR_RS08670 at 1816.242 kb on - strand, within AZOBR_RS08670 at 1816.857 kb on - strand, within AZOBR_RS08675 at 1816.935 kb on - strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.205 kb on - strand, within AZOBR_RS08675 at 1817.205 kb on - strand, within AZOBR_RS08675 at 1817.205 kb on - strand, within AZOBR_RS08675 at 1817.279 kb on + strand, within AZOBR_RS08675 at 1817.306 kb on + strand, within AZOBR_RS08675 at 1817.306 kb on + strand at 1817.307 kb on - strand, within AZOBR_RS08675 at 1817.307 kb on - strand, within AZOBR_RS08675 at 1817.307 kb on - strand, within AZOBR_RS08675 at 1817.594 kb on + strand, within AZOBR_RS08675 at 1817.712 kb on - strand at 1818.575 kb on - strand, within AZOBR_RS08680
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,815,728 - -0.9 1,815,728 - -0.4 1,815,876 - AZOBR_RS08670 0.10 -1.1 1,816,090 - AZOBR_RS08670 0.38 -1.1 1,816,090 - AZOBR_RS08670 0.38 -2.0 1,816,241 + AZOBR_RS08670 0.57 +0.6 1,816,242 - AZOBR_RS08670 0.57 -1.4 1,816,242 - AZOBR_RS08670 0.57 +0.1 1,816,857 - AZOBR_RS08675 0.13 -0.2 1,816,935 - AZOBR_RS08675 0.20 +0.5 1,817,204 + AZOBR_RS08675 0.45 -0.6 1,817,204 + AZOBR_RS08675 0.45 -1.0 1,817,204 + AZOBR_RS08675 0.45 +0.1 1,817,204 + AZOBR_RS08675 0.45 +0.3 1,817,204 + AZOBR_RS08675 0.45 +0.3 1,817,204 + AZOBR_RS08675 0.45 +0.2 1,817,204 + AZOBR_RS08675 0.45 +0.3 1,817,205 - AZOBR_RS08675 0.45 +0.5 1,817,205 - AZOBR_RS08675 0.45 +0.1 1,817,205 - AZOBR_RS08675 0.45 -0.2 1,817,279 + AZOBR_RS08675 0.52 +0.5 1,817,306 + AZOBR_RS08675 0.54 -0.8 1,817,306 + +0.2 1,817,307 - AZOBR_RS08675 0.55 +0.5 1,817,307 - AZOBR_RS08675 0.55 -0.7 1,817,307 - AZOBR_RS08675 0.55 -0.3 1,817,594 + AZOBR_RS08675 0.81 +0.5 1,817,712 - +1.0 1,818,575 - AZOBR_RS08680 0.86 +0.9
Or see this region's nucleotide sequence