Experiment: 2-pentyl-furan 1.335528 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07040 and AZOBR_RS07045 are separated by 56 nucleotides AZOBR_RS07045 and AZOBR_RS07050 are separated by 27 nucleotides AZOBR_RS07050 and AZOBR_RS07055 are separated by 180 nucleotides AZOBR_RS07055 and AZOBR_RS07060 are separated by 144 nucleotides
AZOBR_RS07040: AZOBR_RS07040 - phosphoglucosamine mutase, at 1,489,681 to 1,491,048
_RS07040
AZOBR_RS07045: AZOBR_RS07045 - phosphomethylpyrimidine kinase, at 1,491,105 to 1,491,905
_RS07045
AZOBR_RS07050: AZOBR_RS07050 - transcriptional regulator, at 1,491,933 to 1,493,327
_RS07050
AZOBR_RS07055: AZOBR_RS07055 - hypothetical protein, at 1,493,508 to 1,493,720
_RS07055
AZOBR_RS07060: AZOBR_RS07060 - hypothetical protein, at 1,493,865 to 1,494,188
_RS07060
Position (kb)
1491
1492
1493
1494 Strain fitness (log2 ratio)
-1
0
1 at 1491.046 kb on + strand at 1491.046 kb on + strand at 1491.047 kb on - strand at 1491.903 kb on + strand at 1492.331 kb on - strand, within AZOBR_RS07050 at 1492.439 kb on - strand, within AZOBR_RS07050 at 1492.439 kb on - strand at 1492.612 kb on + strand, within AZOBR_RS07050 at 1492.613 kb on - strand, within AZOBR_RS07050 at 1492.735 kb on + strand, within AZOBR_RS07050 at 1492.736 kb on - strand, within AZOBR_RS07050 at 1492.736 kb on - strand, within AZOBR_RS07050 at 1492.922 kb on - strand, within AZOBR_RS07050 at 1493.539 kb on - strand, within AZOBR_RS07055 at 1493.539 kb on - strand, within AZOBR_RS07055 at 1493.539 kb on - strand, within AZOBR_RS07055 at 1493.775 kb on + strand at 1493.776 kb on - strand at 1493.776 kb on - strand at 1493.827 kb on - strand at 1493.844 kb on - strand at 1493.972 kb on - strand, within AZOBR_RS07060
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.335528 mM remove 1,491,046 + -1.1 1,491,046 + +0.3 1,491,047 - -1.1 1,491,903 + -0.1 1,492,331 - AZOBR_RS07050 0.29 -0.6 1,492,439 - AZOBR_RS07050 0.36 -0.3 1,492,439 - +0.3 1,492,612 + AZOBR_RS07050 0.49 -0.3 1,492,613 - AZOBR_RS07050 0.49 -0.2 1,492,735 + AZOBR_RS07050 0.57 +0.1 1,492,736 - AZOBR_RS07050 0.58 +0.8 1,492,736 - AZOBR_RS07050 0.58 -0.3 1,492,922 - AZOBR_RS07050 0.71 -0.1 1,493,539 - AZOBR_RS07055 0.15 +0.1 1,493,539 - AZOBR_RS07055 0.15 +0.8 1,493,539 - AZOBR_RS07055 0.15 +0.5 1,493,775 + -0.2 1,493,776 - -0.4 1,493,776 - +0.0 1,493,827 - -0.2 1,493,844 - +0.2 1,493,972 - AZOBR_RS07060 0.33 +0.8
Or see this region's nucleotide sequence