Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30610 and AZOBR_RS30615 are separated by 98 nucleotides AZOBR_RS30615 and AZOBR_RS30620 are separated by 484 nucleotides AZOBR_RS30620 and AZOBR_RS30625 are separated by 5 nucleotides
AZOBR_RS30610: AZOBR_RS30610 - acetyl-CoA acetyltransferase, at 223,910 to 225,085
_RS30610
AZOBR_RS30615: AZOBR_RS30615 - acetoacetyl-CoA reductase, at 225,184 to 225,906
_RS30615
AZOBR_RS30620: AZOBR_RS30620 - hypothetical protein, at 226,391 to 226,792
_RS30620
AZOBR_RS30625: AZOBR_RS30625 - MFS transporter, at 226,798 to 228,033
_RS30625
Position (kb) 225
226 Strain fitness (log2 ratio) -2
-1
0
1
2 at 224.370 kb on - strand, within AZOBR_RS30610 at 224.993 kb on + strand at 224.994 kb on - strand at 224.994 kb on - strand at 225.126 kb on + strand at 225.127 kb on - strand at 225.127 kb on - strand at 225.127 kb on - strand at 225.262 kb on + strand, within AZOBR_RS30615 at 225.263 kb on - strand, within AZOBR_RS30615 at 225.281 kb on - strand, within AZOBR_RS30615 at 225.337 kb on + strand, within AZOBR_RS30615 at 225.338 kb on - strand, within AZOBR_RS30615 at 225.608 kb on - strand at 225.622 kb on + strand, within AZOBR_RS30615 at 225.623 kb on - strand, within AZOBR_RS30615 at 225.718 kb on + strand at 225.718 kb on + strand, within AZOBR_RS30615 at 225.901 kb on + strand at 225.901 kb on + strand at 225.902 kb on - strand at 225.902 kb on - strand at 226.315 kb on + strand at 226.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 224,370 - AZOBR_RS30610 0.39 -2.1 224,993 + -0.1 224,994 - -0.0 224,994 - -0.4 225,126 + -1.6 225,127 - +0.3 225,127 - -1.4 225,127 - +1.0 225,262 + AZOBR_RS30615 0.11 -0.0 225,263 - AZOBR_RS30615 0.11 -2.1 225,281 - AZOBR_RS30615 0.13 +0.5 225,337 + AZOBR_RS30615 0.21 -2.0 225,338 - AZOBR_RS30615 0.21 -1.8 225,608 - +0.5 225,622 + AZOBR_RS30615 0.61 +1.2 225,623 - AZOBR_RS30615 0.61 +2.1 225,718 + +0.7 225,718 + AZOBR_RS30615 0.74 +0.3 225,901 + -0.3 225,901 + +0.4 225,902 - -0.1 225,902 - -0.4 226,315 + +0.1 226,316 - +1.1
Or see this region's nucleotide sequence