Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29970 and AZOBR_RS29975 are separated by 30 nucleotides AZOBR_RS29975 and AZOBR_RS29980 are separated by 132 nucleotides AZOBR_RS29980 and AZOBR_RS29985 are separated by 30 nucleotides
AZOBR_RS29970: AZOBR_RS29970 - hypothetical protein, at 65,152 to 65,691
_RS29970
AZOBR_RS29975: AZOBR_RS29975 - AsnC family transcriptional regulator, at 65,722 to 66,150
_RS29975
AZOBR_RS29980: AZOBR_RS29980 - saccharopine dehydrogenase, at 66,283 to 67,410
_RS29980
AZOBR_RS29985: AZOBR_RS29985 - pyruvate oxidase, at 67,441 to 69,195
_RS29985
Position (kb) 66
67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 65.362 kb on + strand, within AZOBR_RS29970 at 65.363 kb on - strand, within AZOBR_RS29970 at 65.401 kb on + strand, within AZOBR_RS29970 at 65.401 kb on + strand, within AZOBR_RS29970 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.766 kb on + strand, within AZOBR_RS29980 at 66.767 kb on - strand, within AZOBR_RS29980 at 66.898 kb on + strand, within AZOBR_RS29980 at 67.178 kb on - strand, within AZOBR_RS29980 at 67.204 kb on + strand, within AZOBR_RS29980 at 67.442 kb on + strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.443 kb on - strand at 67.731 kb on - strand, within AZOBR_RS29985 at 67.731 kb on - strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.820 kb on + strand, within AZOBR_RS29985 at 67.877 kb on + strand, within AZOBR_RS29985 at 68.330 kb on + strand, within AZOBR_RS29985 at 68.330 kb on + strand, within AZOBR_RS29985 at 68.331 kb on - strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.339 kb on + strand, within AZOBR_RS29985 at 68.340 kb on - strand, within AZOBR_RS29985
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 65,362 + AZOBR_RS29970 0.39 +2.5 65,363 - AZOBR_RS29970 0.39 +0.0 65,401 + AZOBR_RS29970 0.46 +1.1 65,401 + AZOBR_RS29970 0.46 -0.4 66,766 + AZOBR_RS29980 0.43 -2.3 66,766 + AZOBR_RS29980 0.43 +0.1 66,766 + AZOBR_RS29980 0.43 -0.6 66,767 - AZOBR_RS29980 0.43 -3.0 66,898 + AZOBR_RS29980 0.55 +0.2 67,178 - AZOBR_RS29980 0.79 -0.0 67,204 + AZOBR_RS29980 0.82 -1.7 67,442 + -0.2 67,443 - +0.6 67,443 - -0.4 67,443 - -0.3 67,443 - +0.9 67,443 - -0.8 67,731 - AZOBR_RS29985 0.17 -1.1 67,731 - AZOBR_RS29985 0.17 -1.5 67,820 + AZOBR_RS29985 0.22 +0.6 67,820 + AZOBR_RS29985 0.22 +0.7 67,820 + AZOBR_RS29985 0.22 +0.3 67,877 + AZOBR_RS29985 0.25 -0.3 68,330 + AZOBR_RS29985 0.51 +0.0 68,330 + AZOBR_RS29985 0.51 -1.5 68,331 - AZOBR_RS29985 0.51 -1.3 68,339 + AZOBR_RS29985 0.51 -0.0 68,339 + AZOBR_RS29985 0.51 +0.2 68,339 + AZOBR_RS29985 0.51 +0.2 68,339 + AZOBR_RS29985 0.51 -0.2 68,340 - AZOBR_RS29985 0.51 -0.6
Or see this region's nucleotide sequence