Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25915 and AZOBR_RS25920 are separated by 49 nucleotides AZOBR_RS25920 and AZOBR_RS25925 are separated by 180 nucleotides AZOBR_RS25925 and AZOBR_RS25930 are separated by 15 nucleotides AZOBR_RS25930 and AZOBR_RS25935 are separated by 22 nucleotides
AZOBR_RS25915: AZOBR_RS25915 - ATPase, at 868,880 to 869,446
_RS25915
AZOBR_RS25920: AZOBR_RS25920 - flavodoxin, at 869,496 to 869,963
_RS25920
AZOBR_RS25925: AZOBR_RS25925 - type II citrate synthase, at 870,144 to 871,427
_RS25925
AZOBR_RS25930: AZOBR_RS25930 - aldose 1-epimerase, at 871,443 to 872,306
_RS25930
AZOBR_RS25935: AZOBR_RS25935 - antibiotic resistance protein, at 872,329 to 872,976
_RS25935
Position (kb) 870
871
872 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 869.470 kb on + strand at 869.471 kb on - strand at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.733 kb on + strand, within AZOBR_RS25920 at 869.733 kb on + strand, within AZOBR_RS25920 at 869.734 kb on - strand, within AZOBR_RS25920 at 869.734 kb on - strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.737 kb on - strand, within AZOBR_RS25920 at 869.737 kb on - strand, within AZOBR_RS25920 at 869.769 kb on + strand, within AZOBR_RS25920 at 869.970 kb on - strand at 869.990 kb on + strand at 870.003 kb on - strand at 870.003 kb on - strand at 870.024 kb on + strand at 870.024 kb on + strand at 870.025 kb on - strand at 870.025 kb on - strand at 870.025 kb on - strand at 870.034 kb on + strand at 870.034 kb on + strand at 870.035 kb on - strand at 870.075 kb on - strand at 870.238 kb on - strand at 870.275 kb on + strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.309 kb on + strand, within AZOBR_RS25925 at 870.310 kb on - strand, within AZOBR_RS25925 at 870.381 kb on + strand, within AZOBR_RS25925 at 870.462 kb on + strand, within AZOBR_RS25925 at 870.462 kb on + strand, within AZOBR_RS25925 at 870.463 kb on - strand, within AZOBR_RS25925 at 870.499 kb on - strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.571 kb on - strand, within AZOBR_RS25925 at 870.663 kb on + strand, within AZOBR_RS25925 at 870.694 kb on - strand, within AZOBR_RS25925 at 870.715 kb on - strand, within AZOBR_RS25925 at 870.732 kb on + strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 871.068 kb on + strand, within AZOBR_RS25925 at 871.068 kb on + strand, within AZOBR_RS25925 at 871.104 kb on + strand, within AZOBR_RS25925 at 871.104 kb on + strand, within AZOBR_RS25925 at 871.105 kb on - strand, within AZOBR_RS25925 at 871.191 kb on + strand, within AZOBR_RS25925 at 871.192 kb on - strand, within AZOBR_RS25925 at 871.192 kb on - strand, within AZOBR_RS25925 at 871.213 kb on - strand, within AZOBR_RS25925 at 871.213 kb on - strand, within AZOBR_RS25925 at 871.231 kb on - strand, within AZOBR_RS25925 at 871.377 kb on + strand at 871.444 kb on + strand at 871.445 kb on - strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.466 kb on + strand at 871.467 kb on - strand at 871.467 kb on - strand at 871.467 kb on - strand at 871.467 kb on - strand at 871.467 kb on - strand at 872.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 869,470 + +0.7 869,471 - +0.6 869,694 + AZOBR_RS25920 0.42 -0.2 869,694 + AZOBR_RS25920 0.42 +0.0 869,694 + AZOBR_RS25920 0.42 -0.4 869,694 + AZOBR_RS25920 0.42 -0.7 869,696 + AZOBR_RS25920 0.43 -0.5 869,696 + AZOBR_RS25920 0.43 -2.4 869,696 + AZOBR_RS25920 0.43 -0.6 869,696 + AZOBR_RS25920 0.43 -0.9 869,697 - AZOBR_RS25920 0.43 +0.4 869,697 - AZOBR_RS25920 0.43 -1.6 869,697 - AZOBR_RS25920 0.43 +0.4 869,697 - AZOBR_RS25920 0.43 -0.0 869,733 + AZOBR_RS25920 0.51 -0.3 869,733 + AZOBR_RS25920 0.51 -0.7 869,734 - AZOBR_RS25920 0.51 -3.0 869,734 - AZOBR_RS25920 0.51 +0.3 869,736 + AZOBR_RS25920 0.51 +0.4 869,736 + AZOBR_RS25920 0.51 +0.8 869,736 + AZOBR_RS25920 0.51 +0.6 869,737 - AZOBR_RS25920 0.51 -0.4 869,737 - AZOBR_RS25920 0.51 -2.1 869,769 + AZOBR_RS25920 0.58 -0.8 869,970 - -0.0 869,990 + +0.1 870,003 - -0.8 870,003 - -0.3 870,024 + +0.2 870,024 + +0.5 870,025 - -0.7 870,025 - +0.5 870,025 - +0.1 870,034 + -0.2 870,034 + +0.4 870,035 - +1.4 870,075 - +0.5 870,238 - -2.1 870,275 + AZOBR_RS25925 0.10 +1.5 870,276 - AZOBR_RS25925 0.10 +0.1 870,276 - AZOBR_RS25925 0.10 -0.1 870,276 - AZOBR_RS25925 0.10 -1.6 870,309 + AZOBR_RS25925 0.13 +0.6 870,310 - AZOBR_RS25925 0.13 -0.7 870,381 + AZOBR_RS25925 0.18 +0.1 870,462 + AZOBR_RS25925 0.25 -1.5 870,462 + AZOBR_RS25925 0.25 +0.5 870,463 - AZOBR_RS25925 0.25 -0.3 870,499 - AZOBR_RS25925 0.28 +0.4 870,570 + AZOBR_RS25925 0.33 -1.9 870,570 + AZOBR_RS25925 0.33 +0.2 870,570 + AZOBR_RS25925 0.33 -1.4 870,571 - AZOBR_RS25925 0.33 +0.3 870,663 + AZOBR_RS25925 0.40 +0.5 870,694 - AZOBR_RS25925 0.43 -2.2 870,715 - AZOBR_RS25925 0.44 -0.7 870,732 + AZOBR_RS25925 0.46 -0.1 870,733 - AZOBR_RS25925 0.46 -0.6 870,733 - AZOBR_RS25925 0.46 +0.1 870,733 - AZOBR_RS25925 0.46 +0.1 870,733 - AZOBR_RS25925 0.46 +0.6 871,068 + AZOBR_RS25925 0.72 -0.6 871,068 + AZOBR_RS25925 0.72 -0.0 871,104 + AZOBR_RS25925 0.75 +1.9 871,104 + AZOBR_RS25925 0.75 +0.6 871,105 - AZOBR_RS25925 0.75 -0.5 871,191 + AZOBR_RS25925 0.82 -0.4 871,192 - AZOBR_RS25925 0.82 -0.0 871,192 - AZOBR_RS25925 0.82 +0.8 871,213 - AZOBR_RS25925 0.83 -0.1 871,213 - AZOBR_RS25925 0.83 -1.1 871,231 - AZOBR_RS25925 0.85 +0.2 871,377 + +0.2 871,444 + -0.6 871,445 - -2.3 871,466 + +0.4 871,466 + +0.1 871,466 + +0.1 871,466 + -0.3 871,466 + +0.2 871,466 + -0.9 871,466 + +0.1 871,466 + -1.3 871,466 + -0.4 871,467 - +1.4 871,467 - -2.4 871,467 - +0.0 871,467 - +0.2 871,467 - -0.6 872,343 - -1.9
Or see this region's nucleotide sequence