Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25645 and AZOBR_RS25650 are separated by 82 nucleotides AZOBR_RS25650 and AZOBR_RS25655 are separated by 71 nucleotides AZOBR_RS25655 and AZOBR_RS25660 are separated by 348 nucleotides
AZOBR_RS25645: AZOBR_RS25645 - amino acid ABC transporter substrate-binding protein, at 801,230 to 802,342
_RS25645
AZOBR_RS25650: AZOBR_RS25650 - hypothetical protein, at 802,425 to 802,889
_RS25650
AZOBR_RS25655: AZOBR_RS25655 - oxidoreductase, at 802,961 to 804,241
_RS25655
AZOBR_RS25660: AZOBR_RS25660 - amidohydrolase, at 804,590 to 805,762
_RS25660
Position (kb) 802
803
804
805 Strain fitness (log2 ratio) -2
-1
0
1
2 at 802.008 kb on + strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.009 kb on - strand, within AZOBR_RS25645 at 802.218 kb on + strand, within AZOBR_RS25645 at 802.219 kb on - strand, within AZOBR_RS25645 at 802.219 kb on - strand, within AZOBR_RS25645 at 802.252 kb on - strand at 802.400 kb on - strand at 802.414 kb on + strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.415 kb on - strand at 802.855 kb on + strand at 802.855 kb on + strand at 802.877 kb on - strand at 803.100 kb on + strand, within AZOBR_RS25655 at 803.100 kb on + strand, within AZOBR_RS25655 at 803.238 kb on + strand, within AZOBR_RS25655 at 803.238 kb on + strand, within AZOBR_RS25655 at 803.239 kb on - strand, within AZOBR_RS25655 at 803.526 kb on + strand, within AZOBR_RS25655 at 803.526 kb on + strand, within AZOBR_RS25655 at 803.731 kb on - strand, within AZOBR_RS25655 at 803.731 kb on - strand, within AZOBR_RS25655 at 803.733 kb on + strand, within AZOBR_RS25655 at 803.734 kb on - strand, within AZOBR_RS25655 at 804.343 kb on + strand at 804.356 kb on - strand at 804.422 kb on + strand at 804.422 kb on + strand at 804.524 kb on + strand at 804.524 kb on + strand at 804.525 kb on - strand at 804.525 kb on - strand at 804.525 kb on - strand at 804.634 kb on - strand at 804.634 kb on - strand at 804.672 kb on + strand at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.729 kb on + strand, within AZOBR_RS25660 at 804.891 kb on + strand, within AZOBR_RS25660 at 805.036 kb on + strand, within AZOBR_RS25660 at 805.215 kb on + strand, within AZOBR_RS25660 at 805.216 kb on - strand, within AZOBR_RS25660
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 802,008 + AZOBR_RS25645 0.70 -0.1 802,009 - AZOBR_RS25645 0.70 +0.2 802,009 - AZOBR_RS25645 0.70 -2.0 802,009 - AZOBR_RS25645 0.70 +0.4 802,218 + AZOBR_RS25645 0.89 +0.2 802,219 - AZOBR_RS25645 0.89 +0.5 802,219 - AZOBR_RS25645 0.89 -0.9 802,252 - -1.9 802,400 - +0.0 802,414 + -0.4 802,415 - +1.1 802,415 - -0.3 802,415 - -1.3 802,415 - -0.3 802,855 + +0.3 802,855 + +0.6 802,877 - +0.1 803,100 + AZOBR_RS25655 0.11 -1.0 803,100 + AZOBR_RS25655 0.11 -0.1 803,238 + AZOBR_RS25655 0.22 -0.4 803,238 + AZOBR_RS25655 0.22 -0.5 803,239 - AZOBR_RS25655 0.22 +0.8 803,526 + AZOBR_RS25655 0.44 -0.5 803,526 + AZOBR_RS25655 0.44 +0.6 803,731 - AZOBR_RS25655 0.60 +0.2 803,731 - AZOBR_RS25655 0.60 +0.4 803,733 + AZOBR_RS25655 0.60 +1.6 803,734 - AZOBR_RS25655 0.60 -0.3 804,343 + -0.2 804,356 - -0.9 804,422 + +1.9 804,422 + -1.8 804,524 + -0.3 804,524 + +1.1 804,525 - -0.3 804,525 - +0.4 804,525 - -0.3 804,634 - +0.2 804,634 - +0.4 804,672 + +0.6 804,729 + AZOBR_RS25660 0.12 -0.8 804,729 + AZOBR_RS25660 0.12 -0.8 804,729 + AZOBR_RS25660 0.12 -0.7 804,729 + AZOBR_RS25660 0.12 +2.1 804,729 + AZOBR_RS25660 0.12 -0.9 804,729 + AZOBR_RS25660 0.12 -1.1 804,891 + AZOBR_RS25660 0.26 -2.5 805,036 + AZOBR_RS25660 0.38 -1.4 805,215 + AZOBR_RS25660 0.53 +0.4 805,216 - AZOBR_RS25660 0.53 -0.5
Or see this region's nucleotide sequence