Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18495 and AZOBR_RS18500 overlap by 1 nucleotides AZOBR_RS18500 and AZOBR_RS18505 are separated by 410 nucleotides
AZOBR_RS18495: AZOBR_RS18495 - metallophosphatase, at 915,457 to 916,713
_RS18495
AZOBR_RS18500: AZOBR_RS18500 - hypothetical protein, at 916,713 to 920,411
_RS18500
AZOBR_RS18505: AZOBR_RS18505 - hypothetical protein, at 920,822 to 921,049
_RS18505
Position (kb) 916
917
918
919
920
921 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 915.883 kb on + strand, within AZOBR_RS18495 at 915.971 kb on - strand, within AZOBR_RS18495 at 915.971 kb on - strand, within AZOBR_RS18495 at 916.042 kb on + strand, within AZOBR_RS18495 at 916.042 kb on + strand, within AZOBR_RS18495 at 916.042 kb on + strand, within AZOBR_RS18495 at 916.141 kb on + strand, within AZOBR_RS18495 at 916.141 kb on + strand, within AZOBR_RS18495 at 916.141 kb on + strand, within AZOBR_RS18495 at 916.142 kb on - strand, within AZOBR_RS18495 at 916.142 kb on - strand, within AZOBR_RS18495 at 916.142 kb on - strand, within AZOBR_RS18495 at 916.202 kb on - strand, within AZOBR_RS18495 at 916.243 kb on + strand, within AZOBR_RS18495 at 916.290 kb on + strand, within AZOBR_RS18495 at 916.290 kb on + strand, within AZOBR_RS18495 at 916.290 kb on + strand, within AZOBR_RS18495 at 916.291 kb on - strand, within AZOBR_RS18495 at 916.291 kb on - strand at 916.291 kb on - strand, within AZOBR_RS18495 at 916.432 kb on + strand, within AZOBR_RS18495 at 916.432 kb on + strand, within AZOBR_RS18495 at 916.433 kb on - strand, within AZOBR_RS18495 at 916.433 kb on - strand, within AZOBR_RS18495 at 916.433 kb on - strand, within AZOBR_RS18495 at 916.433 kb on - strand, within AZOBR_RS18495 at 916.433 kb on - strand, within AZOBR_RS18495 at 916.436 kb on + strand, within AZOBR_RS18495 at 916.436 kb on + strand, within AZOBR_RS18495 at 916.437 kb on - strand, within AZOBR_RS18495 at 916.437 kb on - strand, within AZOBR_RS18495 at 916.437 kb on - strand, within AZOBR_RS18495 at 916.437 kb on - strand, within AZOBR_RS18495 at 916.437 kb on - strand, within AZOBR_RS18495 at 917.304 kb on + strand, within AZOBR_RS18500 at 917.304 kb on + strand, within AZOBR_RS18500 at 917.304 kb on + strand, within AZOBR_RS18500 at 917.305 kb on - strand, within AZOBR_RS18500 at 919.435 kb on - strand, within AZOBR_RS18500 at 920.219 kb on + strand at 920.478 kb on + strand at 920.478 kb on + strand at 920.479 kb on - strand at 920.575 kb on + strand at 920.575 kb on + strand at 920.613 kb on + strand at 920.613 kb on + strand at 920.613 kb on + strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 920.614 kb on - strand at 921.036 kb on + strand at 921.036 kb on + strand at 921.036 kb on + strand at 921.036 kb on - strand at 921.037 kb on - strand at 921.037 kb on - strand at 921.037 kb on - strand at 921.069 kb on + strand at 921.070 kb on - strand at 921.070 kb on - strand at 921.159 kb on + strand at 921.159 kb on + strand at 921.159 kb on + strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.160 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.196 kb on - strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.273 kb on + strand at 921.274 kb on - strand at 921.274 kb on - strand at 921.276 kb on + strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.277 kb on - strand at 921.327 kb on + strand at 921.327 kb on + strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.328 kb on - strand at 921.330 kb on + strand at 921.330 kb on + strand at 921.331 kb on - strand at 921.331 kb on - strand at 921.390 kb on + strand at 921.391 kb on - strand at 921.391 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 915,883 + AZOBR_RS18495 0.34 -0.6 915,971 - AZOBR_RS18495 0.41 +0.2 915,971 - AZOBR_RS18495 0.41 +0.8 916,042 + AZOBR_RS18495 0.47 -1.9 916,042 + AZOBR_RS18495 0.47 -0.9 916,042 + AZOBR_RS18495 0.47 -0.9 916,141 + AZOBR_RS18495 0.54 -0.3 916,141 + AZOBR_RS18495 0.54 +0.5 916,141 + AZOBR_RS18495 0.54 -0.2 916,142 - AZOBR_RS18495 0.54 -0.6 916,142 - AZOBR_RS18495 0.54 -1.1 916,142 - AZOBR_RS18495 0.54 -0.5 916,202 - AZOBR_RS18495 0.59 +0.2 916,243 + AZOBR_RS18495 0.63 -1.1 916,290 + AZOBR_RS18495 0.66 -1.1 916,290 + AZOBR_RS18495 0.66 -0.4 916,290 + AZOBR_RS18495 0.66 -0.2 916,291 - AZOBR_RS18495 0.66 -2.9 916,291 - +0.1 916,291 - AZOBR_RS18495 0.66 +2.0 916,432 + AZOBR_RS18495 0.78 -0.2 916,432 + AZOBR_RS18495 0.78 +0.2 916,433 - AZOBR_RS18495 0.78 -1.3 916,433 - AZOBR_RS18495 0.78 -1.7 916,433 - AZOBR_RS18495 0.78 +0.5 916,433 - AZOBR_RS18495 0.78 -0.8 916,433 - AZOBR_RS18495 0.78 -1.9 916,436 + AZOBR_RS18495 0.78 -0.6 916,436 + AZOBR_RS18495 0.78 -0.2 916,437 - AZOBR_RS18495 0.78 -2.4 916,437 - AZOBR_RS18495 0.78 -0.3 916,437 - AZOBR_RS18495 0.78 +0.9 916,437 - AZOBR_RS18495 0.78 -0.5 916,437 - AZOBR_RS18495 0.78 +0.1 917,304 + AZOBR_RS18500 0.16 +0.5 917,304 + AZOBR_RS18500 0.16 -3.5 917,304 + AZOBR_RS18500 0.16 -0.8 917,305 - AZOBR_RS18500 0.16 -0.3 919,435 - AZOBR_RS18500 0.74 -0.7 920,219 + -0.8 920,478 + +0.2 920,478 + +0.2 920,479 - -0.4 920,575 + -0.2 920,575 + -1.6 920,613 + -1.6 920,613 + +1.0 920,613 + +0.3 920,614 - -0.9 920,614 - +0.3 920,614 - +0.3 920,614 - -0.5 920,614 - -0.2 920,614 - +0.0 920,614 - +0.0 920,614 - -0.6 921,036 + +0.3 921,036 + -2.0 921,036 + -2.0 921,036 - -0.0 921,037 - -1.1 921,037 - -0.4 921,037 - -0.2 921,069 + +1.3 921,070 - -0.7 921,070 - -0.7 921,159 + +0.2 921,159 + +1.2 921,159 + +3.9 921,160 - -0.1 921,160 - -2.0 921,160 - +0.9 921,160 - -0.3 921,160 - -1.3 921,160 - -0.4 921,160 - -1.8 921,196 - -3.1 921,196 - -1.4 921,196 - -3.1 921,196 - -0.8 921,273 + -2.1 921,273 + +1.1 921,273 + +0.1 921,273 + -0.9 921,274 - -0.6 921,274 - +0.3 921,276 + -0.9 921,277 - -0.5 921,277 - +0.0 921,277 - +0.5 921,277 - -1.2 921,327 + -0.2 921,327 + -0.9 921,328 - +1.6 921,328 - -0.1 921,328 - +0.0 921,328 - +0.1 921,328 - -0.0 921,328 - +1.2 921,330 + -0.2 921,330 + +0.1 921,331 - -0.3 921,331 - -0.2 921,390 + -1.8 921,391 - -0.1 921,391 - -0.0
Or see this region's nucleotide sequence