Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS11135 and AZOBR_RS11140 are separated by 225 nucleotides AZOBR_RS11140 and AZOBR_RS11145 overlap by 4 nucleotides AZOBR_RS11145 and AZOBR_RS11150 are separated by 3 nucleotides AZOBR_RS11150 and AZOBR_RS11155 are separated by 133 nucleotides
AZOBR_RS11135: AZOBR_RS11135 - flagellar basal-body rod protein FlgB, at 2,343,428 to 2,343,832
_RS11135
AZOBR_RS11140: AZOBR_RS11140 - flagellar protein FhlB, at 2,344,058 to 2,344,384
_RS11140
AZOBR_RS11145: AZOBR_RS11145 - hypothetical protein, at 2,344,381 to 2,344,755
_RS11145
AZOBR_RS11150: AZOBR_RS11150 - hypothetical protein, at 2,344,759 to 2,345,058
_RS11150
AZOBR_RS11155: AZOBR_RS11155 - hypothetical protein, at 2,345,192 to 2,345,878
_RS11155
Position (kb)
2344
2345
2346 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 2343.956 kb on + strand at 2343.957 kb on - strand at 2343.957 kb on - strand at 2344.003 kb on + strand at 2344.023 kb on - strand at 2344.121 kb on + strand, within AZOBR_RS11140 at 2344.121 kb on + strand, within AZOBR_RS11140 at 2344.121 kb on + strand, within AZOBR_RS11140 at 2344.121 kb on + strand, within AZOBR_RS11140 at 2344.121 kb on + strand, within AZOBR_RS11140 at 2344.122 kb on - strand, within AZOBR_RS11140 at 2344.122 kb on - strand, within AZOBR_RS11140 at 2344.122 kb on - strand, within AZOBR_RS11140 at 2344.320 kb on - strand, within AZOBR_RS11140 at 2344.774 kb on + strand at 2344.774 kb on + strand at 2344.774 kb on + strand at 2344.775 kb on - strand at 2344.775 kb on - strand at 2344.775 kb on - strand at 2345.463 kb on - strand, within AZOBR_RS11155 at 2345.463 kb on - strand, within AZOBR_RS11155 at 2345.787 kb on + strand, within AZOBR_RS11155 at 2345.788 kb on - strand, within AZOBR_RS11155 at 2345.788 kb on - strand, within AZOBR_RS11155 at 2345.834 kb on + strand at 2345.835 kb on - strand at 2345.876 kb on + strand at 2345.877 kb on - strand at 2345.877 kb on - strand at 2345.973 kb on + strand at 2345.973 kb on + strand at 2345.974 kb on - strand at 2345.977 kb on - strand at 2345.996 kb on + strand at 2345.996 kb on + strand at 2345.997 kb on - strand at 2345.997 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 2,343,956 + +2.2 2,343,957 - -0.2 2,343,957 - +1.7 2,344,003 + +2.2 2,344,023 - -0.6 2,344,121 + AZOBR_RS11140 0.19 -0.5 2,344,121 + AZOBR_RS11140 0.19 +0.1 2,344,121 + AZOBR_RS11140 0.19 -1.2 2,344,121 + AZOBR_RS11140 0.19 +0.9 2,344,121 + AZOBR_RS11140 0.19 -0.3 2,344,122 - AZOBR_RS11140 0.20 -1.7 2,344,122 - AZOBR_RS11140 0.20 -3.3 2,344,122 - AZOBR_RS11140 0.20 -5.0 2,344,320 - AZOBR_RS11140 0.80 -2.9 2,344,774 + -4.5 2,344,774 + -4.1 2,344,774 + -4.3 2,344,775 - -4.6 2,344,775 - -1.6 2,344,775 - -0.5 2,345,463 - AZOBR_RS11155 0.39 -3.5 2,345,463 - AZOBR_RS11155 0.39 -1.7 2,345,787 + AZOBR_RS11155 0.87 -1.5 2,345,788 - AZOBR_RS11155 0.87 -0.4 2,345,788 - AZOBR_RS11155 0.87 -2.5 2,345,834 + -3.7 2,345,835 - -0.1 2,345,876 + -0.9 2,345,877 - +2.5 2,345,877 - +0.1 2,345,973 + +2.8 2,345,973 + +0.6 2,345,974 - +0.6 2,345,977 - -0.4 2,345,996 + -0.1 2,345,996 + -0.7 2,345,997 - +0.6 2,345,997 - +0.6
Or see this region's nucleotide sequence