Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06765

Experiment: 2-pentyl-furan 1.780666667 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS06755 and AZOBR_RS06760 are separated by 303 nucleotidesAZOBR_RS06760 and AZOBR_RS06765 are separated by 138 nucleotidesAZOBR_RS06765 and AZOBR_RS06770 are separated by 131 nucleotides AZOBR_RS06755: AZOBR_RS06755 - ribulose-phosphate 3-epimerase, at 1,434,864 to 1,435,520 _RS06755 AZOBR_RS06760: AZOBR_RS06760 - molybdenum transport protein, at 1,435,824 to 1,436,243 _RS06760 AZOBR_RS06765: AZOBR_RS06765 - NADPH:quinone reductase, at 1,436,382 to 1,437,395 _RS06765 AZOBR_RS06770: AZOBR_RS06770 - HxlR family transcriptional regulator, at 1,437,527 to 1,437,850 _RS06770 Position (kb) 1436 1437 1438Strain fitness (log2 ratio) -2 -1 0 1at 1437.131 kb on - strand, within AZOBR_RS06765at 1437.505 kb on + strandat 1437.505 kb on + strandat 1437.505 kb on + strandat 1437.626 kb on + strand, within AZOBR_RS06770at 1437.627 kb on - strand, within AZOBR_RS06770at 1437.753 kb on - strand, within AZOBR_RS06770at 1437.753 kb on - strand, within AZOBR_RS06770at 1437.779 kb on + strand, within AZOBR_RS06770at 1437.973 kb on + strandat 1437.974 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM
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1,437,131 - AZOBR_RS06765 0.74 +0.7
1,437,505 + -0.4
1,437,505 + -2.3
1,437,505 + +1.3
1,437,626 + AZOBR_RS06770 0.31 -2.0
1,437,627 - AZOBR_RS06770 0.31 -0.6
1,437,753 - AZOBR_RS06770 0.70 +0.8
1,437,753 - AZOBR_RS06770 0.70 -0.0
1,437,779 + AZOBR_RS06770 0.78 +0.6
1,437,973 + -0.1
1,437,974 - -0.5

Or see this region's nucleotide sequence