Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05390 and AZOBR_RS05395 are separated by 255 nucleotides AZOBR_RS05395 and AZOBR_RS05400 are separated by 152 nucleotides AZOBR_RS05400 and AZOBR_RS05405 are separated by 6 nucleotides
AZOBR_RS05390: AZOBR_RS05390 - hypothetical protein, at 1,143,030 to 1,144,193
_RS05390
AZOBR_RS05395: AZOBR_RS05395 - pterin-4-alpha-carbinolamine dehydratase, at 1,144,449 to 1,144,721
_RS05395
AZOBR_RS05400: AZOBR_RS05400 - DNA polymerase, at 1,144,874 to 1,145,479
_RS05400
AZOBR_RS05405: AZOBR_RS05405 - glucokinase, at 1,145,486 to 1,146,421
_RS05405
Position (kb) 1144
1145
1146 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1144.169 kb on - strand at 1144.305 kb on - strand at 1144.439 kb on - strand at 1144.546 kb on + strand, within AZOBR_RS05395 at 1144.547 kb on - strand, within AZOBR_RS05395 at 1144.697 kb on - strand at 1145.399 kb on + strand, within AZOBR_RS05400 at 1145.399 kb on + strand, within AZOBR_RS05400 at 1145.399 kb on + strand, within AZOBR_RS05400 at 1145.399 kb on + strand, within AZOBR_RS05400 at 1145.400 kb on - strand, within AZOBR_RS05400 at 1145.400 kb on - strand, within AZOBR_RS05400 at 1145.400 kb on - strand, within AZOBR_RS05400 at 1145.400 kb on - strand, within AZOBR_RS05400 at 1145.478 kb on - strand at 1145.547 kb on + strand at 1145.547 kb on + strand at 1145.548 kb on - strand at 1145.548 kb on - strand at 1145.548 kb on - strand at 1145.661 kb on + strand, within AZOBR_RS05405 at 1145.661 kb on + strand, within AZOBR_RS05405 at 1145.661 kb on + strand, within AZOBR_RS05405 at 1145.661 kb on + strand, within AZOBR_RS05405 at 1145.662 kb on - strand, within AZOBR_RS05405 at 1145.842 kb on - strand, within AZOBR_RS05405 at 1145.842 kb on - strand, within AZOBR_RS05405 at 1145.842 kb on - strand, within AZOBR_RS05405 at 1146.300 kb on + strand, within AZOBR_RS05405
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 1,144,169 - +0.6 1,144,305 - -2.2 1,144,439 - -0.5 1,144,546 + AZOBR_RS05395 0.36 -0.1 1,144,547 - AZOBR_RS05395 0.36 +0.2 1,144,697 - -1.0 1,145,399 + AZOBR_RS05400 0.87 +0.7 1,145,399 + AZOBR_RS05400 0.87 -0.1 1,145,399 + AZOBR_RS05400 0.87 -0.4 1,145,399 + AZOBR_RS05400 0.87 -4.2 1,145,400 - AZOBR_RS05400 0.87 -0.4 1,145,400 - AZOBR_RS05400 0.87 -0.8 1,145,400 - AZOBR_RS05400 0.87 -1.5 1,145,400 - AZOBR_RS05400 0.87 -1.9 1,145,478 - -1.4 1,145,547 + -0.7 1,145,547 + +0.0 1,145,548 - -1.0 1,145,548 - +1.5 1,145,548 - -0.6 1,145,661 + AZOBR_RS05405 0.19 +0.1 1,145,661 + AZOBR_RS05405 0.19 -0.5 1,145,661 + AZOBR_RS05405 0.19 -0.4 1,145,661 + AZOBR_RS05405 0.19 -0.2 1,145,662 - AZOBR_RS05405 0.19 +0.5 1,145,842 - AZOBR_RS05405 0.38 +0.0 1,145,842 - AZOBR_RS05405 0.38 -2.5 1,145,842 - AZOBR_RS05405 0.38 +1.4 1,146,300 + AZOBR_RS05405 0.87 -0.9
Or see this region's nucleotide sequence