Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03390 and AZOBR_RS03395 are separated by 260 nucleotides AZOBR_RS03395 and AZOBR_RS03400 are separated by 77 nucleotides AZOBR_RS03400 and AZOBR_RS03405 are separated by 88 nucleotides
AZOBR_RS03390: AZOBR_RS03390 - protein tyrosine kinase, at 719,427 to 721,700
_RS03390
AZOBR_RS03395: AZOBR_RS03395 - Crp/Fnr family transcriptional regulator, at 721,961 to 722,629
_RS03395
AZOBR_RS03400: AZOBR_RS03400 - membrane protein, at 722,707 to 722,898
_RS03400
AZOBR_RS03405: AZOBR_RS03405 - transcriptional regulator, at 722,987 to 723,745
_RS03405
Position (kb) 721
722
723 Strain fitness (log2 ratio) -2
-1
0
1
2 at 721.033 kb on + strand, within AZOBR_RS03390 at 721.033 kb on + strand, within AZOBR_RS03390 at 721.033 kb on + strand, within AZOBR_RS03390 at 721.034 kb on - strand, within AZOBR_RS03390 at 721.034 kb on - strand, within AZOBR_RS03390 at 721.108 kb on + strand, within AZOBR_RS03390 at 721.108 kb on + strand, within AZOBR_RS03390 at 721.273 kb on + strand, within AZOBR_RS03390 at 721.273 kb on + strand, within AZOBR_RS03390 at 721.273 kb on + strand, within AZOBR_RS03390 at 721.274 kb on - strand, within AZOBR_RS03390 at 721.274 kb on - strand, within AZOBR_RS03390 at 721.438 kb on + strand, within AZOBR_RS03390 at 721.439 kb on - strand, within AZOBR_RS03390 at 721.492 kb on + strand at 721.568 kb on + strand at 721.745 kb on + strand at 721.745 kb on + strand at 721.754 kb on + strand at 721.755 kb on - strand at 721.755 kb on - strand at 721.755 kb on - strand at 721.755 kb on - strand at 721.800 kb on + strand at 721.800 kb on + strand at 721.801 kb on - strand at 721.801 kb on - strand at 721.801 kb on - strand at 721.801 kb on - strand at 722.234 kb on + strand, within AZOBR_RS03395 at 722.695 kb on + strand at 722.696 kb on - strand at 722.696 kb on - strand at 722.857 kb on + strand, within AZOBR_RS03400 at 722.857 kb on + strand, within AZOBR_RS03400 at 722.857 kb on + strand, within AZOBR_RS03400 at 722.858 kb on - strand, within AZOBR_RS03400 at 722.977 kb on + strand at 722.977 kb on + strand at 722.977 kb on + strand at 722.978 kb on - strand at 722.978 kb on - strand at 723.027 kb on - strand at 723.027 kb on - strand at 723.305 kb on + strand at 723.305 kb on + strand, within AZOBR_RS03405
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 721,033 + AZOBR_RS03390 0.71 +0.0 721,033 + AZOBR_RS03390 0.71 -0.5 721,033 + AZOBR_RS03390 0.71 -0.5 721,034 - AZOBR_RS03390 0.71 +0.2 721,034 - AZOBR_RS03390 0.71 +0.2 721,108 + AZOBR_RS03390 0.74 -0.4 721,108 + AZOBR_RS03390 0.74 +0.4 721,273 + AZOBR_RS03390 0.81 +0.5 721,273 + AZOBR_RS03390 0.81 -1.5 721,273 + AZOBR_RS03390 0.81 -0.1 721,274 - AZOBR_RS03390 0.81 +0.4 721,274 - AZOBR_RS03390 0.81 +1.9 721,438 + AZOBR_RS03390 0.88 -2.5 721,439 - AZOBR_RS03390 0.88 +0.2 721,492 + -0.3 721,568 + -0.2 721,745 + +0.4 721,745 + +1.5 721,754 + -0.5 721,755 - -0.8 721,755 - -0.6 721,755 - +0.1 721,755 - -1.4 721,800 + -0.7 721,800 + +0.0 721,801 - -1.0 721,801 - +0.2 721,801 - -0.4 721,801 - -0.3 722,234 + AZOBR_RS03395 0.41 -1.7 722,695 + +0.4 722,696 - +1.6 722,696 - -0.7 722,857 + AZOBR_RS03400 0.78 -1.3 722,857 + AZOBR_RS03400 0.78 +1.3 722,857 + AZOBR_RS03400 0.78 -1.1 722,858 - AZOBR_RS03400 0.79 -1.2 722,977 + +0.1 722,977 + -1.6 722,977 + -2.3 722,978 - +0.7 722,978 - -0.1 723,027 - +0.8 723,027 - -0.6 723,305 + +2.7 723,305 + AZOBR_RS03405 0.42 -0.9
Or see this region's nucleotide sequence