Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02095 and AZOBR_RS02100 are separated by 111 nucleotides
AZOBR_RS02095: AZOBR_RS02095 - hypothetical protein, at 430,046 to 430,396
_RS02095
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
Position (kb) 430
431 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 429.134 kb on + strand at 429.135 kb on - strand at 429.135 kb on - strand at 429.272 kb on + strand at 429.272 kb on + strand at 429.273 kb on - strand at 429.273 kb on - strand at 429.320 kb on + strand at 429.321 kb on - strand at 429.323 kb on + strand at 429.324 kb on - strand at 429.426 kb on - strand at 429.426 kb on - strand at 429.426 kb on - strand at 429.719 kb on + strand at 429.719 kb on + strand at 429.949 kb on - strand at 430.229 kb on + strand, within AZOBR_RS02095 at 430.271 kb on + strand, within AZOBR_RS02095 at 430.271 kb on + strand, within AZOBR_RS02095 at 430.272 kb on - strand, within AZOBR_RS02095 at 430.286 kb on + strand, within AZOBR_RS02095 at 430.286 kb on + strand, within AZOBR_RS02095 at 430.287 kb on - strand, within AZOBR_RS02095 at 430.352 kb on + strand, within AZOBR_RS02095 at 430.352 kb on + strand, within AZOBR_RS02095 at 430.395 kb on - strand at 430.608 kb on + strand, within AZOBR_RS02100 at 430.671 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.758 kb on + strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 430.759 kb on - strand, within AZOBR_RS02100 at 431.022 kb on + strand, within AZOBR_RS02100 at 431.022 kb on + strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.023 kb on - strand, within AZOBR_RS02100 at 431.127 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.305 kb on - strand, within AZOBR_RS02100
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 429,134 + -1.1 429,135 - +1.4 429,135 - -0.8 429,272 + -2.0 429,272 + -0.3 429,273 - -1.0 429,273 - -0.4 429,320 + -0.9 429,321 - +0.4 429,323 + -0.5 429,324 - -0.5 429,426 - +0.7 429,426 - -1.2 429,426 - -0.2 429,719 + -1.3 429,719 + -0.1 429,949 - -2.4 430,229 + AZOBR_RS02095 0.52 -1.1 430,271 + AZOBR_RS02095 0.64 +0.9 430,271 + AZOBR_RS02095 0.64 -0.7 430,272 - AZOBR_RS02095 0.64 -0.1 430,286 + AZOBR_RS02095 0.68 -0.2 430,286 + AZOBR_RS02095 0.68 +2.7 430,287 - AZOBR_RS02095 0.69 -0.0 430,352 + AZOBR_RS02095 0.87 -1.4 430,352 + AZOBR_RS02095 0.87 +0.2 430,395 - -0.5 430,608 + AZOBR_RS02100 0.11 -0.3 430,671 + AZOBR_RS02100 0.17 -2.4 430,758 + AZOBR_RS02100 0.27 -0.0 430,758 + AZOBR_RS02100 0.27 -1.7 430,758 + AZOBR_RS02100 0.27 +0.8 430,758 + AZOBR_RS02100 0.27 -1.4 430,758 + AZOBR_RS02100 0.27 -0.2 430,758 + AZOBR_RS02100 0.27 -2.9 430,758 + AZOBR_RS02100 0.27 +1.4 430,759 - AZOBR_RS02100 0.27 -0.2 430,759 - AZOBR_RS02100 0.27 +1.8 430,759 - AZOBR_RS02100 0.27 -0.0 430,759 - AZOBR_RS02100 0.27 -2.5 430,759 - AZOBR_RS02100 0.27 +0.5 430,759 - AZOBR_RS02100 0.27 -3.0 431,022 + AZOBR_RS02100 0.55 -0.3 431,022 + AZOBR_RS02100 0.55 -0.2 431,023 - AZOBR_RS02100 0.55 -0.2 431,023 - AZOBR_RS02100 0.55 +0.7 431,023 - AZOBR_RS02100 0.55 +1.5 431,127 + AZOBR_RS02100 0.66 +0.1 431,304 + AZOBR_RS02100 0.85 -0.1 431,304 + AZOBR_RS02100 0.85 +0.5 431,304 + AZOBR_RS02100 0.85 -0.3 431,304 + AZOBR_RS02100 0.85 +0.5 431,305 - AZOBR_RS02100 0.85 -0.2
Or see this region's nucleotide sequence