Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00860 and AZOBR_RS00865 are separated by 172 nucleotides AZOBR_RS00865 and AZOBR_RS00870 are separated by 323 nucleotides
AZOBR_RS00860: AZOBR_RS00860 - elongation factor 4, at 169,124 to 170,926
_RS00860
AZOBR_RS00865: AZOBR_RS00865 - membrane protein, at 171,099 to 171,836
_RS00865
AZOBR_RS00870: AZOBR_RS00870 - LysR family transcriptional regulator, at 172,160 to 173,044
_RS00870
Position (kb) 171
172 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 170.255 kb on + strand, within AZOBR_RS00860 at 170.256 kb on - strand, within AZOBR_RS00860 at 171.159 kb on + strand at 171.160 kb on - strand at 171.174 kb on + strand, within AZOBR_RS00865 at 171.174 kb on + strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.423 kb on + strand, within AZOBR_RS00865 at 171.424 kb on - strand, within AZOBR_RS00865 at 171.424 kb on - strand, within AZOBR_RS00865 at 171.544 kb on - strand, within AZOBR_RS00865 at 171.544 kb on - strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 172.077 kb on + strand at 172.084 kb on + strand at 172.084 kb on + strand at 172.085 kb on - strand at 172.370 kb on + strand, within AZOBR_RS00870 at 172.371 kb on - strand, within AZOBR_RS00870 at 172.586 kb on + strand, within AZOBR_RS00870
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 170,255 + AZOBR_RS00860 0.63 -0.3 170,256 - AZOBR_RS00860 0.63 +2.1 171,159 + +0.7 171,160 - -1.2 171,174 + AZOBR_RS00865 0.10 +0.1 171,174 + AZOBR_RS00865 0.10 +0.0 171,175 - AZOBR_RS00865 0.10 -0.1 171,175 - AZOBR_RS00865 0.10 -0.2 171,175 - AZOBR_RS00865 0.10 +0.1 171,175 - AZOBR_RS00865 0.10 -3.6 171,423 + AZOBR_RS00865 0.44 +0.6 171,424 - AZOBR_RS00865 0.44 +1.2 171,424 - AZOBR_RS00865 0.44 +0.4 171,544 - AZOBR_RS00865 0.60 -0.9 171,544 - AZOBR_RS00865 0.60 +0.6 171,611 + AZOBR_RS00865 0.69 -2.0 171,611 + AZOBR_RS00865 0.69 +0.6 171,611 + AZOBR_RS00865 0.69 +0.4 171,611 + AZOBR_RS00865 0.69 -1.9 171,611 + AZOBR_RS00865 0.69 -0.5 171,612 - AZOBR_RS00865 0.70 -0.4 171,612 - AZOBR_RS00865 0.70 +1.1 171,612 - AZOBR_RS00865 0.70 -1.7 171,612 - AZOBR_RS00865 0.70 +0.0 172,077 + -0.7 172,084 + -0.8 172,084 + +0.3 172,085 - -0.2 172,370 + AZOBR_RS00870 0.24 +0.7 172,371 - AZOBR_RS00870 0.24 -0.5 172,586 + AZOBR_RS00870 0.48 -0.5
Or see this region's nucleotide sequence