Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29585 and AZOBR_RS29590 are separated by 30 nucleotides AZOBR_RS29590 and AZOBR_RS29595 overlap by 11 nucleotides AZOBR_RS29595 and AZOBR_RS29600 are separated by 520 nucleotides
AZOBR_RS29585: AZOBR_RS29585 - hypothetical protein, at 768,559 to 768,846
_RS29585
AZOBR_RS29590: AZOBR_RS29590 - hypothetical protein, at 768,877 to 769,620
_RS29590
AZOBR_RS29595: AZOBR_RS29595 - hypothetical protein, at 769,610 to 770,242
_RS29595
AZOBR_RS29600: AZOBR_RS29600 - hypothetical protein, at 770,763 to 771,053
_RS29600
Position (kb) 769
770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 768.813 kb on + strand, within AZOBR_RS29585 at 768.814 kb on - strand, within AZOBR_RS29585 at 768.847 kb on + strand at 768.847 kb on + strand at 768.878 kb on + strand at 769.038 kb on + strand, within AZOBR_RS29590 at 769.038 kb on + strand, within AZOBR_RS29590 at 769.039 kb on - strand, within AZOBR_RS29590 at 769.072 kb on - strand, within AZOBR_RS29590 at 769.087 kb on + strand, within AZOBR_RS29590 at 769.087 kb on + strand, within AZOBR_RS29590 at 769.088 kb on - strand, within AZOBR_RS29590 at 769.088 kb on - strand, within AZOBR_RS29590 at 769.158 kb on - strand, within AZOBR_RS29590 at 769.158 kb on - strand, within AZOBR_RS29590 at 769.251 kb on - strand, within AZOBR_RS29590 at 769.251 kb on - strand, within AZOBR_RS29590 at 769.251 kb on - strand, within AZOBR_RS29590 at 769.643 kb on - strand at 769.707 kb on + strand, within AZOBR_RS29595 at 769.707 kb on + strand, within AZOBR_RS29595 at 769.707 kb on + strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.708 kb on - strand, within AZOBR_RS29595 at 769.722 kb on + strand, within AZOBR_RS29595 at 769.722 kb on + strand, within AZOBR_RS29595 at 769.723 kb on - strand, within AZOBR_RS29595 at 769.723 kb on - strand, within AZOBR_RS29595 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.879 kb on + strand, within AZOBR_RS29595 at 769.880 kb on - strand, within AZOBR_RS29595 at 769.891 kb on + strand, within AZOBR_RS29595 at 769.892 kb on - strand, within AZOBR_RS29595 at 770.225 kb on + strand at 770.285 kb on + strand at 770.379 kb on + strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.380 kb on - strand at 770.651 kb on + strand at 770.651 kb on + strand at 770.664 kb on + strand at 770.665 kb on - strand at 770.665 kb on - strand at 770.702 kb on + strand at 770.914 kb on + strand, within AZOBR_RS29600 at 770.915 kb on - strand, within AZOBR_RS29600 at 770.926 kb on + strand, within AZOBR_RS29600 at 770.926 kb on + strand, within AZOBR_RS29600 at 770.927 kb on - strand, within AZOBR_RS29600 at 771.051 kb on + strand at 771.051 kb on + strand at 771.052 kb on - strand at 771.052 kb on - strand at 771.060 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 768,813 + AZOBR_RS29585 0.88 +0.1 768,814 - AZOBR_RS29585 0.89 -0.5 768,847 + +0.7 768,847 + +0.0 768,878 + -0.4 769,038 + AZOBR_RS29590 0.22 -1.8 769,038 + AZOBR_RS29590 0.22 +0.7 769,039 - AZOBR_RS29590 0.22 +0.5 769,072 - AZOBR_RS29590 0.26 +0.1 769,087 + AZOBR_RS29590 0.28 -1.0 769,087 + AZOBR_RS29590 0.28 +1.9 769,088 - AZOBR_RS29590 0.28 -1.4 769,088 - AZOBR_RS29590 0.28 +0.4 769,158 - AZOBR_RS29590 0.38 -0.4 769,158 - AZOBR_RS29590 0.38 -0.6 769,251 - AZOBR_RS29590 0.50 -1.0 769,251 - AZOBR_RS29590 0.50 +0.3 769,251 - AZOBR_RS29590 0.50 -0.1 769,643 - +0.7 769,707 + AZOBR_RS29595 0.15 +1.6 769,707 + AZOBR_RS29595 0.15 -1.1 769,707 + AZOBR_RS29595 0.15 +0.5 769,708 - AZOBR_RS29595 0.15 +1.0 769,708 - AZOBR_RS29595 0.15 -0.7 769,708 - AZOBR_RS29595 0.15 -0.8 769,708 - AZOBR_RS29595 0.15 +0.1 769,708 - AZOBR_RS29595 0.15 +0.1 769,722 + AZOBR_RS29595 0.18 -0.7 769,722 + AZOBR_RS29595 0.18 +1.2 769,723 - AZOBR_RS29595 0.18 -1.0 769,723 - AZOBR_RS29595 0.18 +0.9 769,879 + AZOBR_RS29595 0.42 +0.5 769,879 + AZOBR_RS29595 0.42 +0.5 769,880 - AZOBR_RS29595 0.43 -0.7 769,891 + AZOBR_RS29595 0.44 -1.7 769,892 - AZOBR_RS29595 0.45 -0.4 770,225 + -2.0 770,285 + +0.1 770,379 + -0.6 770,380 - -0.8 770,380 - -0.0 770,380 - +0.5 770,651 + +0.2 770,651 + +1.9 770,664 + +2.1 770,665 - -0.1 770,665 - +0.9 770,702 + +1.5 770,914 + AZOBR_RS29600 0.52 -2.4 770,915 - AZOBR_RS29600 0.52 -0.7 770,926 + AZOBR_RS29600 0.56 -0.3 770,926 + AZOBR_RS29600 0.56 -1.9 770,927 - AZOBR_RS29600 0.56 -1.1 771,051 + -1.0 771,051 + +1.8 771,052 - +0.9 771,052 - -2.2 771,060 - -3.2
Or see this region's nucleotide sequence