Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27955 and AZOBR_RS27960 overlap by 4 nucleotides AZOBR_RS27960 and AZOBR_RS27965 are separated by 3 nucleotides
AZOBR_RS27955: AZOBR_RS27955 - glycoside hydrolase family 43, at 442,243 to 443,313
_RS27955
AZOBR_RS27960: AZOBR_RS27960 - multidrug ABC transporter ATP-binding protein, at 443,310 to 446,057
_RS27960
AZOBR_RS27965: AZOBR_RS27965 - membrane protein, at 446,061 to 447,182
_RS27965
Position (kb) 443
444
445
446
447 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 442.316 kb on + strand at 442.993 kb on + strand, within AZOBR_RS27955 at 442.993 kb on + strand, within AZOBR_RS27955 at 442.993 kb on + strand, within AZOBR_RS27955 at 442.994 kb on - strand, within AZOBR_RS27955 at 442.994 kb on - strand, within AZOBR_RS27955 at 442.994 kb on - strand, within AZOBR_RS27955 at 442.994 kb on - strand, within AZOBR_RS27955 at 442.994 kb on - strand, within AZOBR_RS27955 at 443.080 kb on + strand, within AZOBR_RS27955 at 443.080 kb on + strand, within AZOBR_RS27955 at 443.080 kb on + strand, within AZOBR_RS27955 at 443.215 kb on + strand at 443.254 kb on + strand at 443.254 kb on + strand at 443.255 kb on - strand at 443.255 kb on - strand at 443.376 kb on + strand at 443.376 kb on + strand at 443.377 kb on - strand at 443.583 kb on + strand at 443.583 kb on + strand at 443.584 kb on - strand at 443.584 kb on - strand at 443.584 kb on - strand at 443.935 kb on - strand, within AZOBR_RS27960 at 444.369 kb on + strand, within AZOBR_RS27960 at 444.370 kb on - strand, within AZOBR_RS27960 at 444.841 kb on - strand, within AZOBR_RS27960 at 444.841 kb on - strand, within AZOBR_RS27960 at 445.440 kb on + strand, within AZOBR_RS27960 at 445.572 kb on + strand, within AZOBR_RS27960 at 445.573 kb on - strand, within AZOBR_RS27960 at 445.623 kb on + strand, within AZOBR_RS27960 at 445.624 kb on - strand, within AZOBR_RS27960 at 445.734 kb on + strand, within AZOBR_RS27960 at 445.734 kb on + strand, within AZOBR_RS27960 at 445.735 kb on - strand, within AZOBR_RS27960 at 445.735 kb on - strand, within AZOBR_RS27960 at 446.146 kb on - strand at 446.167 kb on - strand at 446.460 kb on + strand, within AZOBR_RS27965 at 446.460 kb on + strand, within AZOBR_RS27965 at 446.461 kb on - strand, within AZOBR_RS27965
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 442,316 + -0.6 442,993 + AZOBR_RS27955 0.70 -0.4 442,993 + AZOBR_RS27955 0.70 -0.0 442,993 + AZOBR_RS27955 0.70 -2.8 442,994 - AZOBR_RS27955 0.70 +1.0 442,994 - AZOBR_RS27955 0.70 -1.0 442,994 - AZOBR_RS27955 0.70 -0.7 442,994 - AZOBR_RS27955 0.70 +1.4 442,994 - AZOBR_RS27955 0.70 -0.5 443,080 + AZOBR_RS27955 0.78 -0.5 443,080 + AZOBR_RS27955 0.78 +2.4 443,080 + AZOBR_RS27955 0.78 -2.3 443,215 + -3.4 443,254 + -1.0 443,254 + +0.5 443,255 - +2.0 443,255 - -0.9 443,376 + -0.7 443,376 + +0.1 443,377 - -0.6 443,583 + -1.0 443,583 + +0.4 443,584 - +1.1 443,584 - -1.7 443,584 - +1.8 443,935 - AZOBR_RS27960 0.23 -2.2 444,369 + AZOBR_RS27960 0.39 +0.6 444,370 - AZOBR_RS27960 0.39 -1.0 444,841 - AZOBR_RS27960 0.56 +1.0 444,841 - AZOBR_RS27960 0.56 +0.1 445,440 + AZOBR_RS27960 0.78 +1.6 445,572 + AZOBR_RS27960 0.82 -2.5 445,573 - AZOBR_RS27960 0.82 +0.4 445,623 + AZOBR_RS27960 0.84 +2.0 445,624 - AZOBR_RS27960 0.84 -0.4 445,734 + AZOBR_RS27960 0.88 +1.0 445,734 + AZOBR_RS27960 0.88 -0.0 445,735 - AZOBR_RS27960 0.88 +0.3 445,735 - AZOBR_RS27960 0.88 -0.1 446,146 - -3.4 446,167 - +1.4 446,460 + AZOBR_RS27965 0.36 -0.1 446,460 + AZOBR_RS27965 0.36 +0.0 446,461 - AZOBR_RS27965 0.36 -0.3
Or see this region's nucleotide sequence