Experiment: 2-pentyl-furan 1.780666667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24080 and AZOBR_RS24085 are separated by 121 nucleotides AZOBR_RS24085 and AZOBR_RS24090 are separated by 55 nucleotides
AZOBR_RS24080: AZOBR_RS24080 - methyl-accepting chemotaxis protein, at 441,022 to 442,725
_RS24080
AZOBR_RS24085: AZOBR_RS24085 - AMP-dependent synthetase, at 442,847 to 444,376
_RS24085
AZOBR_RS24090: AZOBR_RS24090 - ABC transporter permease, at 444,432 to 446,201
_RS24090
Position (kb) 442
443
444
445 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 442.136 kb on + strand, within AZOBR_RS24080 at 442.137 kb on - strand, within AZOBR_RS24080 at 442.397 kb on + strand, within AZOBR_RS24080 at 442.690 kb on + strand at 442.690 kb on + strand at 442.796 kb on - strand at 442.877 kb on + strand at 442.878 kb on - strand at 442.951 kb on - strand at 443.469 kb on + strand, within AZOBR_RS24085 at 443.640 kb on + strand, within AZOBR_RS24085 at 443.748 kb on + strand, within AZOBR_RS24085 at 443.749 kb on - strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.880 kb on + strand, within AZOBR_RS24085 at 443.881 kb on - strand, within AZOBR_RS24085 at 443.881 kb on - strand, within AZOBR_RS24085 at 443.881 kb on - strand, within AZOBR_RS24085 at 443.881 kb on - strand, within AZOBR_RS24085 at 443.881 kb on - strand, within AZOBR_RS24085 at 443.881 kb on - strand, within AZOBR_RS24085 at 444.087 kb on + strand, within AZOBR_RS24085 at 444.087 kb on + strand, within AZOBR_RS24085 at 444.384 kb on - strand at 444.384 kb on - strand at 444.853 kb on + strand, within AZOBR_RS24090 at 444.853 kb on + strand, within AZOBR_RS24090 at 444.853 kb on + strand, within AZOBR_RS24090 at 444.853 kb on + strand, within AZOBR_RS24090 at 444.854 kb on - strand, within AZOBR_RS24090 at 445.054 kb on + strand, within AZOBR_RS24090 at 445.055 kb on - strand, within AZOBR_RS24090 at 445.055 kb on - strand, within AZOBR_RS24090 at 445.177 kb on + strand, within AZOBR_RS24090 at 445.363 kb on + strand, within AZOBR_RS24090 at 445.363 kb on + strand, within AZOBR_RS24090 at 445.364 kb on - strand, within AZOBR_RS24090
Per-strain Table
Position Strand Gene LocusTag Fraction 2-pentyl-furan 1.780666667 mM remove 442,136 + AZOBR_RS24080 0.65 +0.5 442,137 - AZOBR_RS24080 0.65 +1.0 442,397 + AZOBR_RS24080 0.81 +1.0 442,690 + +1.0 442,690 + +0.2 442,796 - +1.1 442,877 + +2.0 442,878 - -0.1 442,951 - +0.0 443,469 + AZOBR_RS24085 0.41 -1.0 443,640 + AZOBR_RS24085 0.52 +0.1 443,748 + AZOBR_RS24085 0.59 -1.0 443,749 - AZOBR_RS24085 0.59 +0.7 443,880 + AZOBR_RS24085 0.68 -1.0 443,880 + AZOBR_RS24085 0.68 +0.1 443,880 + AZOBR_RS24085 0.68 +1.3 443,880 + AZOBR_RS24085 0.68 -0.2 443,880 + AZOBR_RS24085 0.68 -0.2 443,880 + AZOBR_RS24085 0.68 +0.1 443,880 + AZOBR_RS24085 0.68 +1.4 443,880 + AZOBR_RS24085 0.68 +0.4 443,881 - AZOBR_RS24085 0.68 -0.7 443,881 - AZOBR_RS24085 0.68 +0.4 443,881 - AZOBR_RS24085 0.68 -1.4 443,881 - AZOBR_RS24085 0.68 +0.2 443,881 - AZOBR_RS24085 0.68 -2.7 443,881 - AZOBR_RS24085 0.68 +1.1 444,087 + AZOBR_RS24085 0.81 -0.6 444,087 + AZOBR_RS24085 0.81 -3.1 444,384 - -0.1 444,384 - +0.5 444,853 + AZOBR_RS24090 0.24 -1.3 444,853 + AZOBR_RS24090 0.24 +1.1 444,853 + AZOBR_RS24090 0.24 -0.0 444,853 + AZOBR_RS24090 0.24 -0.2 444,854 - AZOBR_RS24090 0.24 -1.0 445,054 + AZOBR_RS24090 0.35 +0.5 445,055 - AZOBR_RS24090 0.35 +1.4 445,055 - AZOBR_RS24090 0.35 +2.1 445,177 + AZOBR_RS24090 0.42 -0.5 445,363 + AZOBR_RS24090 0.53 -0.2 445,363 + AZOBR_RS24090 0.53 -0.0 445,364 - AZOBR_RS24090 0.53 +0.7
Or see this region's nucleotide sequence